Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   BARD7_RS10755 Genome accession   NZ_CP016913
Coordinates   2216324..2217124 (-) Length   266 a.a.
NCBI ID   WP_045510705.1    Uniprot ID   A0AAP7TAW5
Organism   Bacillus amyloliquefaciens strain RD7-7     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2211324..2222124
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BARD7_RS10730 (BARD7_02201) - 2211809..2212441 (+) 633 WP_065981855.1 helix-turn-helix domain-containing protein -
  BARD7_RS19135 - 2212734..2212871 (+) 138 WP_014470646.1 hypothetical protein -
  BARD7_RS10735 (BARD7_02203) - 2212965..2214083 (+) 1119 WP_065982894.1 NADH-dependent flavin oxidoreductase -
  BARD7_RS10740 (BARD7_02204) - 2214210..2214422 (+) 213 WP_014470647.1 spore germination protein -
  BARD7_RS10745 (BARD7_02205) - 2214547..2214759 (+) 213 WP_013352823.1 spore germination protein -
  BARD7_RS10750 (BARD7_02206) alr 2214952..2216133 (+) 1182 WP_065981856.1 alanine racemase -
  BARD7_RS10755 (BARD7_02208) spo0A 2216324..2217124 (-) 801 WP_045510705.1 sporulation transcription factor Spo0A Regulator
  BARD7_RS10760 (BARD7_02209) spoIVB 2217405..2218685 (-) 1281 WP_065981857.1 SpoIVB peptidase -
  BARD7_RS10765 (BARD7_02210) recN 2218849..2220579 (-) 1731 WP_065981858.1 DNA repair protein RecN Machinery gene
  BARD7_RS10770 (BARD7_02211) ahrC 2220611..2221060 (-) 450 WP_013352828.1 transcriptional regulator AhrC/ArgR -
  BARD7_RS10775 (BARD7_02212) - 2221157..2222002 (-) 846 WP_013352829.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29572.07 Da        Isoelectric Point: 6.3903

>NTDB_id=193626 BARD7_RS10755 WP_045510705.1 2216324..2217124(-) (spo0A) [Bacillus amyloliquefaciens strain RD7-7]
MEKIKVCVADDNRELVSLLSEYIEGQDDMEVIGVAYNGQECLSLFKDKNPDVLVLDIIMPHLDGLAVLERLRESELAKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNVSSVTHRAPSAQSSIIRSQPEPKRKNLDASITSII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=193626 BARD7_RS10755 WP_045510705.1 2216324..2217124(-) (spo0A) [Bacillus amyloliquefaciens strain RD7-7]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAGCCTGTTGAGTGAATATATAGAGGGACAGGA
TGATATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTTTCTTTGTTTAAAGATAAAAATCCCGATGTGCTCG
TTTTAGATATTATTATGCCGCATCTGGACGGTCTTGCGGTTTTGGAGCGCCTCCGGGAATCAGAACTTGCGAAGCAGCCG
AATGTCATCATGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTAGGTGCGTCTTATTTCATCCT
GAAGCCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTAAGCGGAAATGTCAGCAGCGTCACACACCGTGCGC
CGTCCGCGCAAAGCAGCATCATCCGCAGTCAGCCTGAGCCGAAGCGGAAAAATCTCGATGCCAGCATTACAAGCATTATC
CATGAGATCGGTGTGCCTGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGTATAACGATATTGA
ACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGACATCGCCAAAAAATTCAACACGACCGCAAGCCGTGTAGAACGGG
CCATCCGCCATGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGACTCCATTTCTTCGCTGTTCGGGTATACTGTAAGC
ATGACAAAAGCAAAACCAACCAATTCAGAGTTCATCGCGATGGTTGCTGACAAGCTGAGATTGGAGCATAAAGCTTCATA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

96.629

100

0.97

Multiple sequence alignment