Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   BARD7_RS05465 Genome accession   NZ_CP016913
Coordinates   1118485..1119141 (+) Length   218 a.a.
NCBI ID   WP_065981172.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain RD7-7     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1113485..1124141
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BARD7_RS05440 (BARD7_01105) oppF 1114014..1114931 (+) 918 WP_045506975.1 oligopeptide ABC transporter ATP-binding protein OppF -
  BARD7_RS05445 (BARD7_01106) - 1115039..1116226 (+) 1188 WP_065981170.1 putative glycoside hydrolase -
  BARD7_RS05450 (BARD7_01107) - 1116344..1116922 (+) 579 WP_013351830.1 GNAT family N-acetyltransferase -
  BARD7_RS05455 (BARD7_01108) spx 1117100..1117495 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  BARD7_RS05460 (BARD7_01109) - 1117553..1118209 (-) 657 WP_065981171.1 TerC family protein -
  BARD7_RS05465 (BARD7_01110) mecA 1118485..1119141 (+) 657 WP_065981172.1 adaptor protein MecA Regulator
  BARD7_RS05470 (BARD7_01111) - 1119292..1120452 (+) 1161 WP_065981173.1 competence protein CoiA family protein -
  BARD7_RS05475 (BARD7_01112) pepF 1120681..1122510 (+) 1830 WP_013351834.1 oligoendopeptidase F Regulator
  BARD7_RS19090 (BARD7_01113) - 1122546..1122713 (-) 168 WP_016938224.1 hypothetical protein -
  BARD7_RS05480 (BARD7_01114) spxH 1122998..1123900 (-) 903 WP_013351835.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25981.78 Da        Isoelectric Point: 4.1059

>NTDB_id=193613 BARD7_RS05465 WP_065981172.1 1118485..1119141(+) (mecA) [Bacillus amyloliquefaciens strain RD7-7]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAENREEKEQKLQFTLRFDDFENLISLSKLNLNGIKTSLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAQESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=193613 BARD7_RS05465 WP_065981172.1 1118485..1119141(+) (mecA) [Bacillus amyloliquefaciens strain RD7-7]
ATGGAAATAGAAAGAATTAATGAGCATACAGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAATCGGGAGGAGAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ACGATTTTGAGAATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATTAAAACGAGCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
AGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGAAAATTGGTGATCGCTGATCATGCGTTATATACGATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895

Multiple sequence alignment