Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | BEN76_RS02800 | Genome accession | NZ_CP016896 |
| Coordinates | 595384..595770 (+) | Length | 128 a.a. |
| NCBI ID | WP_004948134.1 | Uniprot ID | - |
| Organism | Acinetobacter soli strain GFJ2 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 590384..600770
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BEN76_RS02770 (BEN76_02770) | kdsB | 591291..592052 (+) | 762 | WP_076032175.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| BEN76_RS02775 (BEN76_02775) | - | 592067..593053 (+) | 987 | WP_076032176.1 | DNA polymerase III subunit delta' | - |
| BEN76_RS02780 (BEN76_02780) | - | 593056..593400 (+) | 345 | WP_004948143.1 | PilZ domain-containing protein | - |
| BEN76_RS02785 (BEN76_02785) | - | 593416..594189 (+) | 774 | WP_076032177.1 | TatD family hydrolase | - |
| BEN76_RS02790 (BEN76_02790) | - | 594228..594839 (+) | 612 | WP_076032178.1 | TetR/AcrR family transcriptional regulator | - |
| BEN76_RS02795 (BEN76_02795) | - | 594849..595394 (+) | 546 | WP_004938724.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| BEN76_RS02800 (BEN76_02800) | xcpV | 595384..595770 (+) | 387 | WP_004948134.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| BEN76_RS02805 (BEN76_02805) | xcpW | 595767..596390 (+) | 624 | WP_004938718.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| BEN76_RS02810 (BEN76_02810) | gspK | 596407..597375 (+) | 969 | WP_076032179.1 | type II secretion system minor pseudopilin GspK | - |
| BEN76_RS02815 (BEN76_02815) | - | 597540..598136 (+) | 597 | WP_025095495.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| BEN76_RS02820 (BEN76_02820) | ung | 598191..598904 (+) | 714 | WP_076032180.1 | uracil-DNA glycosylase | - |
| BEN76_RS02825 (BEN76_02825) | - | 598901..600025 (+) | 1125 | WP_004948124.1 | enoyl-CoA hydratase/isomerase family protein | - |
| BEN76_RS02830 (BEN76_02830) | tadA | 600031..600543 (+) | 513 | WP_004938709.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 128 a.a. Molecular weight: 14260.44 Da Isoelectric Point: 10.0033
>NTDB_id=193511 BEN76_RS02800 WP_004948134.1 595384..595770(+) (xcpV) [Acinetobacter soli strain GFJ2]
MKTKGFTLLEVMVALAIFATAAVALTKLGMQYTQSTANAVLRTKAQFVAMNEAAMMQINREWMQGTSSKQVTSQGETWQV
DKTAQATISPNVQRIEIQISRFDPQQNKVEAGITHMVFFNYPPKENVS
MKTKGFTLLEVMVALAIFATAAVALTKLGMQYTQSTANAVLRTKAQFVAMNEAAMMQINREWMQGTSSKQVTSQGETWQV
DKTAQATISPNVQRIEIQISRFDPQQNKVEAGITHMVFFNYPPKENVS
Nucleotide
Download Length: 387 bp
>NTDB_id=193511 BEN76_RS02800 WP_004948134.1 595384..595770(+) (xcpV) [Acinetobacter soli strain GFJ2]
ATGAAAACTAAAGGGTTTACATTATTAGAAGTGATGGTGGCGCTCGCGATTTTTGCAACCGCTGCGGTGGCCTTGACCAA
GCTCGGTATGCAGTATACTCAGTCTACAGCCAATGCCGTATTAAGAACCAAAGCACAATTCGTGGCAATGAACGAAGCCG
CCATGATGCAAATTAATCGTGAATGGATGCAAGGCACATCCTCAAAGCAAGTGACGTCTCAGGGTGAAACATGGCAAGTC
GATAAAACTGCGCAGGCGACGATTAGCCCAAACGTACAGCGGATTGAAATTCAGATCAGCCGCTTTGATCCTCAGCAAAA
CAAAGTTGAAGCGGGAATTACGCATATGGTGTTTTTCAATTATCCGCCTAAAGAAAACGTCTCATGA
ATGAAAACTAAAGGGTTTACATTATTAGAAGTGATGGTGGCGCTCGCGATTTTTGCAACCGCTGCGGTGGCCTTGACCAA
GCTCGGTATGCAGTATACTCAGTCTACAGCCAATGCCGTATTAAGAACCAAAGCACAATTCGTGGCAATGAACGAAGCCG
CCATGATGCAAATTAATCGTGAATGGATGCAAGGCACATCCTCAAAGCAAGTGACGTCTCAGGGTGAAACATGGCAAGTC
GATAAAACTGCGCAGGCGACGATTAGCCCAAACGTACAGCGGATTGAAATTCAGATCAGCCGCTTTGATCCTCAGCAAAA
CAAAGTTGAAGCGGGAATTACGCATATGGTGTTTTTCAATTATCCGCCTAAAGAAAACGTCTCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
79.032 |
96.875 |
0.766 |