Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   BSHJ0_RS20250 Genome accession   NZ_CP016894
Coordinates   3862089..3862208 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain HJ0-6     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3857089..3867208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSHJ0_RS20225 (BSHJ0_03982) albG 3857252..3857953 (+) 702 WP_038427991.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  BSHJ0_RS20230 (BSHJ0_03983) ywhL 3857959..3859332 (-) 1374 WP_038427992.1 YncE family protein -
  BSHJ0_RS20235 (BSHJ0_03984) ywhK 3859375..3860730 (-) 1356 WP_038427993.1 YncE family protein -
  BSHJ0_RS23380 - 3860727..3860957 (-) 231 WP_009968328.1 hypothetical protein -
  BSHJ0_RS20245 (BSHJ0_03985) rapF 3860960..3862105 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  BSHJ0_RS20250 (BSHJ0_03986) phrF 3862089..3862208 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  BSHJ0_RS20255 (BSHJ0_03987) - 3862461..3862940 (+) 480 WP_038427994.1 hypothetical protein -
  BSHJ0_RS20260 (BSHJ0_03988) - 3863089..3863877 (+) 789 WP_015714893.1 membrane protein -
  BSHJ0_RS20265 (BSHJ0_03989) - 3863864..3864538 (+) 675 WP_015714894.1 hypothetical protein -
  BSHJ0_RS20270 (BSHJ0_03990) - 3864548..3865345 (+) 798 WP_236822299.1 hypothetical protein -
  BSHJ0_RS20275 (BSHJ0_03991) - 3865348..3865995 (+) 648 WP_015714896.1 ABC transporter ATP-binding protein -
  BSHJ0_RS20280 (BSHJ0_03992) - 3865988..3866548 (+) 561 WP_015714897.1 hypothetical protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=193483 BSHJ0_RS20250 WP_009968329.1 3862089..3862208(+) (phrF) [Bacillus subtilis strain HJ0-6]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=193483 BSHJ0_RS20250 WP_009968329.1 3862089..3862208(+) (phrF) [Bacillus subtilis strain HJ0-6]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment