Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   BSHJ0_RS17215 Genome accession   NZ_CP016894
Coordinates   3259906..3262218 (-) Length   770 a.a.
NCBI ID   WP_068947635.1    Uniprot ID   -
Organism   Bacillus subtilis strain HJ0-6     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3254906..3267218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSHJ0_RS17175 (BSHJ0_03380) mrpB 3255373..3255804 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  BSHJ0_RS17180 (BSHJ0_03381) mrpC 3255804..3256145 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  BSHJ0_RS17185 (BSHJ0_03382) mrpD 3256138..3257619 (+) 1482 WP_029725869.1 Na+/H+ antiporter subunit D -
  BSHJ0_RS17190 (BSHJ0_03383) mrpE 3257625..3258101 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  BSHJ0_RS17195 (BSHJ0_03384) mrpF 3258101..3258385 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  BSHJ0_RS17200 (BSHJ0_03385) mnhG 3258369..3258743 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  BSHJ0_RS17205 (BSHJ0_03386) yuxO 3258782..3259162 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  BSHJ0_RS17210 (BSHJ0_03387) comA 3259181..3259825 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  BSHJ0_RS17215 (BSHJ0_03388) comP 3259906..3262218 (-) 2313 WP_068947635.1 histidine kinase Regulator
  BSHJ0_RS17220 (BSHJ0_03389) comX 3262234..3262455 (-) 222 WP_014114983.1 competence pheromone ComX -
  BSHJ0_RS17225 (BSHJ0_03390) - 3262452..3263321 (-) 870 WP_015714626.1 polyprenyl synthetase family protein -
  BSHJ0_RS17230 (BSHJ0_03391) degQ 3263506..3263646 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  BSHJ0_RS22935 - 3263868..3263993 (+) 126 WP_121549029.1 hypothetical protein -
  BSHJ0_RS17235 (BSHJ0_03392) - 3264108..3264476 (+) 369 WP_038427878.1 hypothetical protein -
  BSHJ0_RS17240 (BSHJ0_03393) pdeH 3264452..3265681 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89347.36 Da        Isoelectric Point: 8.3122

>NTDB_id=193472 BSHJ0_RS17215 WP_068947635.1 3259906..3262218(-) (comP) [Bacillus subtilis strain HJ0-6]
MHRNNNFYKYLSLAFIILSFVYVIYLSYISVFNIFVGADVKINEQGKLEVTKVVDYTDEYYSGVKKGDIILEVNGQKGSE
IQLESGRLVNVESLTVERDNKSFHLQNVSLISEENLFMYLIPLISYSICLFCIFFVYRINKVRKSPSAFVLILFLLFVSV
AYVSACGARRGEEVSTYLLVLTLVSCPILYIHFIYKYFAELGTKLFKKKILIIMYILPLVNLLLEAVLSNRLNSSAFLSN
LNLISFFVLVLTVSILIHQGIRKIKQNEQKSILKILAYINILSFSPFIIFFVIPYVLFDKYLSPFSLAAFTLVIPFSLVY
QFMTNRLYNIDFVVGRLKYYGFLAITPTVIVVTIFNYIQKPEDNFYSVKLTVVIYLLMFAVFYFKEIIDFRFKLKRFTEK
FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKI
KEFKQGFIIKIGERGDRSFLVLCFSSYNTFRLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKL
MYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLY
DLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDD
GVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=193472 BSHJ0_RS17215 WP_068947635.1 3259906..3262218(-) (comP) [Bacillus subtilis strain HJ0-6]
ATGCACAGAAATAATAACTTCTATAAATATTTGTCTCTAGCTTTTATCATTTTAAGTTTTGTTTATGTGATCTACCTCTC
TTATATTTCTGTTTTTAATATCTTTGTAGGTGCGGATGTGAAGATTAATGAACAGGGTAAGTTAGAGGTTACCAAAGTTG
TGGATTATACAGATGAATATTATTCGGGTGTAAAAAAGGGTGACATCATTCTCGAAGTTAATGGGCAAAAAGGAAGTGAA
ATCCAGTTAGAAAGCGGAAGGTTGGTCAATGTAGAAAGCTTAACTGTTGAAAGAGATAATAAATCATTTCATTTACAAAA
TGTAAGCCTAATAAGTGAAGAAAATTTATTTATGTATCTCATTCCGCTCATATCTTATTCAATCTGTTTATTTTGTATAT
TTTTTGTTTACAGAATAAATAAAGTAAGAAAATCACCTTCTGCTTTTGTTTTAATCTTATTTTTGTTATTTGTATCAGTA
GCATATGTAAGTGCCTGCGGGGCAAGAAGAGGTGAAGAGGTTAGCACTTATCTACTTGTCCTTACTTTAGTAAGTTGTCC
AATTTTATATATACATTTCATATATAAATACTTTGCGGAATTGGGTACAAAGTTATTCAAAAAGAAGATTTTAATCATTA
TGTATATACTTCCACTCGTAAACCTGTTACTAGAAGCTGTTTTGAGTAATAGATTAAATTCTTCGGCTTTTTTGTCAAAC
TTGAACTTGATTTCCTTTTTTGTCCTAGTCCTTACTGTATCTATTCTTATCCATCAAGGGATTAGAAAAATCAAACAAAA
TGAGCAAAAGTCAATTTTAAAAATCCTTGCTTATATAAATATCCTGTCTTTTAGTCCTTTTATTATCTTTTTTGTTATTC
CCTATGTGTTGTTTGATAAGTATCTTTCACCCTTTAGTTTGGCAGCCTTTACACTTGTTATACCTTTTTCTTTAGTGTAT
CAATTTATGACAAATAGACTTTATAATATTGACTTTGTTGTAGGACGGCTTAAATACTATGGATTTTTAGCCATTACACC
TACTGTTATTGTGGTCACCATATTTAATTACATTCAAAAACCAGAAGATAACTTTTACTCCGTTAAACTAACAGTTGTAA
TATATTTGCTTATGTTTGCTGTCTTTTACTTTAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAA
TTTAATTATCAAGATGGGATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATCACTT
TAAAAATACAATCCTAGAAGTATTAAACATAGATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTA
GTAAGAACAACTTTAAAGATTTGACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATT
AAAGAGTTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTA
TAATACTTTTAGATTAACAAGGGATGAAATTGCATGGCTTCAAACATTAGCGTTTTATACAAATGTCTCATTGGAAAACG
TTATGAAAATCGAAGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTC
ATGTATACGATCGAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTT
AAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTTAAGAAGGGTGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTG
TACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTAT
GATCTTGGGCTGGTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATTCGTTTAAATAC
CGGGAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGG
TCAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGAT
GGCGTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGC
TTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.177

99.87

0.561


Multiple sequence alignment