Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | BE844_RS03590 | Genome accession | NZ_CP016873 |
| Coordinates | 804423..804737 (-) | Length | 104 a.a. |
| NCBI ID | WP_027220533.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pneumophila strain FFI105 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 799423..809737
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE844_RS03565 (BE844_03565) | - | 799849..800349 (-) | 501 | WP_011214243.1 | hypothetical protein | - |
| BE844_RS03570 (BE844_03570) | - | 800840..801700 (+) | 861 | WP_011215957.1 | polysaccharide deacetylase family protein | - |
| BE844_RS03575 (BE844_03575) | - | 801824..803014 (-) | 1191 | WP_070321972.1 | murein transglycosylase A | - |
| BE844_RS03580 (BE844_03580) | lpp1976 | 803124..803681 (-) | 558 | WP_061637207.1 | hypothetical protein | Machinery gene |
| BE844_RS03585 (BE844_03585) | lpp1977 | 803678..804484 (-) | 807 | WP_061637208.1 | PilW family protein | Machinery gene |
| BE844_RS03590 (BE844_03590) | lpp1978 | 804423..804737 (-) | 315 | WP_027220533.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BE844_RS03595 (BE844_03595) | hisC | 804897..806006 (+) | 1110 | WP_027220534.1 | histidinol-phosphate transaminase | - |
| BE844_RS03600 (BE844_03600) | - | 806043..806384 (+) | 342 | WP_011215963.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| BE844_RS03605 (BE844_03605) | secF | 806574..807491 (-) | 918 | WP_011215964.1 | protein translocase subunit SecF | - |
| BE844_RS03610 (BE844_03610) | secD | 807504..809360 (-) | 1857 | WP_011215965.1 | protein translocase subunit SecD | - |
| BE844_RS03615 (BE844_03615) | yajC | 809382..809717 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12249.39 Da Isoelectric Point: 10.0591
>NTDB_id=193163 BE844_RS03590 WP_027220533.1 804423..804737(-) (lpp1978) [Legionella pneumophila subsp. pneumophila strain FFI105]
MSKHKGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDLINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLGAN
MSKHKGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDLINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLGAN
Nucleotide
Download Length: 315 bp
>NTDB_id=193163 BE844_RS03590 WP_027220533.1 804423..804737(-) (lpp1978) [Legionella pneumophila subsp. pneumophila strain FFI105]
ATGAGCAAGCATAAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATCTAATCAATCATCTTATCTGGCGAATCCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGGTGCTAATTGA
ATGAGCAAGCATAAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATCTAATCAATCATCTTATCTGGCGAATCCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGGTGCTAATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
100 |
100 |
1 |
| lpp1978 | Legionella pneumophila str. Paris |
98.077 |
100 |
0.981 |