Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | BE843_RS00100 | Genome accession | NZ_CP016872 |
| Coordinates | 18799..19113 (+) | Length | 104 a.a. |
| NCBI ID | WP_027220533.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pneumophila strain FFI104 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 13799..24113
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE843_RS00075 (BE843_00075) | yajC | 13819..14154 (+) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
| BE843_RS00080 (BE843_00080) | secD | 14176..16032 (+) | 1857 | WP_011215965.1 | protein translocase subunit SecD | - |
| BE843_RS00085 (BE843_00085) | secF | 16045..16962 (+) | 918 | WP_011215964.1 | protein translocase subunit SecF | - |
| BE843_RS00090 (BE843_00090) | - | 17152..17493 (-) | 342 | WP_011215963.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| BE843_RS00095 (BE843_00095) | hisC | 17530..18639 (-) | 1110 | WP_027220534.1 | histidinol-phosphate transaminase | - |
| BE843_RS00100 (BE843_00100) | lpp1978 | 18799..19113 (+) | 315 | WP_027220533.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BE843_RS00105 (BE843_00105) | lpp1977 | 19052..19858 (+) | 807 | WP_061637208.1 | PilW family protein | Machinery gene |
| BE843_RS00110 (BE843_00110) | lpp1976 | 19855..20412 (+) | 558 | WP_061637207.1 | hypothetical protein | Machinery gene |
| BE843_RS00115 (BE843_00115) | - | 20522..21712 (+) | 1191 | WP_070321972.1 | murein transglycosylase A | - |
| BE843_RS00120 (BE843_00120) | - | 21836..22696 (-) | 861 | WP_011215957.1 | polysaccharide deacetylase family protein | - |
| BE843_RS00125 (BE843_00125) | - | 23187..23687 (+) | 501 | WP_011214243.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12249.39 Da Isoelectric Point: 10.0591
>NTDB_id=193108 BE843_RS00100 WP_027220533.1 18799..19113(+) (lpp1978) [Legionella pneumophila subsp. pneumophila strain FFI104]
MSKHKGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDLINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLGAN
MSKHKGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDLINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLGAN
Nucleotide
Download Length: 315 bp
>NTDB_id=193108 BE843_RS00100 WP_027220533.1 18799..19113(+) (lpp1978) [Legionella pneumophila subsp. pneumophila strain FFI104]
ATGAGCAAGCATAAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATCTAATCAATCATCTTATCTGGCGAATCCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGGTGCTAATTGA
ATGAGCAAGCATAAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATCTAATCAATCATCTTATCTGGCGAATCCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGGTGCTAATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
100 |
100 |
1 |
| lpp1978 | Legionella pneumophila str. Paris |
98.077 |
100 |
0.981 |