Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | BE841_RS02945 | Genome accession | NZ_CP016868 |
| Coordinates | 691222..691536 (+) | Length | 104 a.a. |
| NCBI ID | WP_011215961.1 | Uniprot ID | Q5WV44 |
| Organism | Legionella pneumophila subsp. pneumophila strain FFI102 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 686222..696536
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE841_RS02920 (BE841_02920) | yajC | 686242..686577 (+) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
| BE841_RS02925 (BE841_02925) | secD | 686599..688455 (+) | 1857 | WP_011215965.1 | protein translocase subunit SecD | - |
| BE841_RS02930 (BE841_02930) | secF | 688468..689385 (+) | 918 | WP_011215964.1 | protein translocase subunit SecF | - |
| BE841_RS02935 (BE841_02935) | - | 689575..689916 (-) | 342 | WP_011215963.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| BE841_RS02940 (BE841_02940) | hisC | 689953..691062 (-) | 1110 | WP_011215962.1 | histidinol-phosphate transaminase | - |
| BE841_RS02945 (BE841_02945) | lpp1978 | 691222..691536 (+) | 315 | WP_011215961.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BE841_RS02950 (BE841_02950) | lpp1977 | 691475..692281 (+) | 807 | WP_011215960.1 | PilW family protein | Machinery gene |
| BE841_RS02955 (BE841_02955) | lpp1976 | 692278..692835 (+) | 558 | WP_011215959.1 | hypothetical protein | Machinery gene |
| BE841_RS02960 (BE841_02960) | - | 692945..694135 (+) | 1191 | WP_011215958.1 | murein transglycosylase A | - |
| BE841_RS02965 (BE841_02965) | - | 694259..695119 (-) | 861 | WP_011215957.1 | polysaccharide deacetylase family protein | - |
| BE841_RS02970 (BE841_02970) | - | 695610..696110 (+) | 501 | WP_011214243.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12327.37 Da Isoelectric Point: 8.4863
>NTDB_id=193031 BE841_RS02945 WP_011215961.1 691222..691536(+) (lpp1978) [Legionella pneumophila subsp. pneumophila strain FFI102]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
Nucleotide
Download Length: 315 bp
>NTDB_id=193031 BE841_RS02945 WP_011215961.1 691222..691536(+) (lpp1978) [Legionella pneumophila subsp. pneumophila strain FFI102]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
94.231 |
100 |
0.942 |
| lpp1978 | Legionella pneumophila str. Paris |
92.308 |
100 |
0.923 |