Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   AB895_RS08500 Genome accession   NZ_CP021342
Coordinates   1772401..1773036 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain B8342     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1767401..1778036
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB895_RS08485 (AB895_1731) - 1768188..1769372 (+) 1185 WP_004737879.1 S41 family peptidase -
  AB895_RS08490 (AB895_1732) - 1769376..1770797 (-) 1422 WP_004737882.1 sigma-54 dependent transcriptional regulator -
  AB895_RS08495 (AB895_1733) pilS 1770822..1772390 (-) 1569 WP_004737883.1 PAS domain-containing sensor histidine kinase Regulator
  AB895_RS08500 (AB895_1734) letA 1772401..1773036 (-) 636 WP_000633799.1 response regulator Regulator
  AB895_RS08505 (AB895_1735) pbpG 1773249..1774295 (+) 1047 WP_003384760.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  AB895_RS08510 (AB895_1736) thrC 1774401..1775540 (-) 1140 WP_000063593.1 threonine synthase -
  AB895_RS08515 (AB895_1737) - 1775596..1776897 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  AB895_RS08520 (AB895_1738) - 1777142..1777957 (-) 816 WP_000011163.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=192838 AB895_RS08500 WP_000633799.1 1772401..1773036(-) (letA) [Acinetobacter baumannii strain B8342]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=192838 AB895_RS08500 WP_000633799.1 1772401..1773036(-) (letA) [Acinetobacter baumannii strain B8342]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGTGTAGAAACAACCCGTCGTTTATTACAGACGGCCCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACCTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55