Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BC359_RS05265 | Genome accession | NZ_CP016790 |
| Coordinates | 1017559..1018617 (+) | Length | 352 a.a. |
| NCBI ID | WP_078989280.1 | Uniprot ID | - |
| Organism | Priestia flexa strain KLBMP 4941 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1012559..1023617
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BC359_RS05240 (BC359_05230) | - | 1014428..1015336 (+) | 909 | WP_237071976.1 | M14 family metallopeptidase | - |
| BC359_RS05245 (BC359_05235) | - | 1015393..1015566 (-) | 174 | WP_025911564.1 | DUF2759 domain-containing protein | - |
| BC359_RS05250 (BC359_05240) | - | 1015763..1016395 (+) | 633 | WP_025911563.1 | MBL fold metallo-hydrolase | - |
| BC359_RS05255 (BC359_05245) | - | 1016439..1016678 (-) | 240 | WP_025911561.1 | DUF2626 domain-containing protein | - |
| BC359_RS05260 (BC359_05250) | - | 1016958..1017341 (+) | 384 | WP_061784685.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| BC359_RS05265 (BC359_05255) | comGA | 1017559..1018617 (+) | 1059 | WP_078989280.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BC359_RS05270 (BC359_05260) | comGB | 1018598..1019656 (+) | 1059 | WP_025911558.1 | competence type IV pilus assembly protein ComGB | - |
| BC359_RS05275 (BC359_05265) | comGC | 1019670..1019981 (+) | 312 | WP_025911556.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BC359_RS05280 (BC359_05270) | comGD | 1019968..1020417 (+) | 450 | WP_237072035.1 | competence type IV pilus minor pilin ComGD | - |
| BC359_RS05285 (BC359_05275) | - | 1020401..1020736 (+) | 336 | WP_025911553.1 | type II secretion system protein | - |
| BC359_RS05290 (BC359_05280) | comGF | 1020733..1021161 (+) | 429 | WP_025911552.1 | competence type IV pilus minor pilin ComGF | - |
| BC359_RS05295 (BC359_05285) | comGG | 1021124..1021543 (+) | 420 | WP_061784683.1 | competence type IV pilus minor pilin ComGG | - |
| BC359_RS05300 (BC359_05290) | - | 1021594..1022220 (-) | 627 | Protein_993 | cupin domain-containing protein | - |
| BC359_RS05305 (BC359_05295) | - | 1022365..1022556 (+) | 192 | WP_025911548.1 | YqzE family protein | - |
| BC359_RS05310 (BC359_05300) | - | 1022594..1023415 (-) | 822 | WP_076512140.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 39885.01 Da Isoelectric Point: 8.3459
>NTDB_id=192262 BC359_RS05265 WP_078989280.1 1017559..1018617(+) (comGA) [Priestia flexa strain KLBMP 4941]
MNEIEQLATRMIREACEMKSSDIHIIPRARDAIIQLRVDQDLVAHQTLQKEVSERLISHFKFLGSMDIGERRKPQNGALS
TTIDHIKVNLRLSTLPTLQDESLVIRVLPQTQTTSLKYLSLFQNHTKKLISLLKHSHGLIVFTGPTGSGKTTTLYTLLHE
VNHLLNRNVITLEDPIEQQSEKVLQVQVNERAGITYATGLKAILRHDPDIIMVGEIRDAETAQIAVRAALTGHLVLTTMH
TKDTKGSIYRLLEFGVSIQEIEQTLVAVAAQRLVEIKCNFCEGRCHPLCKKERLNRQASVYELLYGREVNEVINEVKGKE
FQYDYARLRDAIRKGIALGYLYSHALDGWGSY
MNEIEQLATRMIREACEMKSSDIHIIPRARDAIIQLRVDQDLVAHQTLQKEVSERLISHFKFLGSMDIGERRKPQNGALS
TTIDHIKVNLRLSTLPTLQDESLVIRVLPQTQTTSLKYLSLFQNHTKKLISLLKHSHGLIVFTGPTGSGKTTTLYTLLHE
VNHLLNRNVITLEDPIEQQSEKVLQVQVNERAGITYATGLKAILRHDPDIIMVGEIRDAETAQIAVRAALTGHLVLTTMH
TKDTKGSIYRLLEFGVSIQEIEQTLVAVAAQRLVEIKCNFCEGRCHPLCKKERLNRQASVYELLYGREVNEVINEVKGKE
FQYDYARLRDAIRKGIALGYLYSHALDGWGSY
Nucleotide
Download Length: 1059 bp
>NTDB_id=192262 BC359_RS05265 WP_078989280.1 1017559..1018617(+) (comGA) [Priestia flexa strain KLBMP 4941]
TTGAATGAAATTGAACAATTAGCCACACGCATGATTCGTGAAGCATGTGAGATGAAGAGCTCGGATATTCACATTATCCC
TCGAGCTAGAGATGCCATAATTCAGCTAAGAGTTGATCAAGATTTGGTTGCTCATCAAACGCTCCAAAAAGAGGTATCTG
AACGACTCATTTCCCACTTTAAATTTTTAGGGAGCATGGATATTGGTGAAAGACGAAAGCCTCAAAATGGTGCACTGTCT
ACAACAATCGATCATATTAAAGTTAATCTACGTTTATCCACTTTACCTACATTGCAGGATGAAAGTCTCGTTATTCGTGT
ATTACCCCAAACGCAAACAACTTCTCTTAAATATTTATCACTTTTTCAAAATCATACCAAAAAACTTATTTCACTGCTTA
AGCATTCACATGGATTAATTGTGTTTACTGGGCCAACAGGATCCGGTAAAACAACAACTTTGTATACGTTACTTCATGAG
GTCAACCATTTATTAAATCGAAATGTCATTACGCTTGAAGATCCAATTGAACAGCAGAGTGAAAAAGTACTGCAGGTACA
AGTGAATGAACGAGCTGGCATCACGTATGCAACAGGTTTAAAAGCAATTTTACGTCATGACCCTGATATTATTATGGTCG
GGGAAATCCGCGACGCTGAAACAGCTCAAATTGCGGTTCGCGCAGCTTTAACCGGTCATTTAGTACTGACAACTATGCAT
ACGAAAGATACAAAAGGCTCTATTTATCGATTGCTTGAGTTTGGTGTTAGTATTCAAGAAATTGAACAAACGTTGGTAGC
CGTAGCTGCACAGCGATTAGTCGAAATAAAATGTAATTTTTGTGAAGGAAGATGTCATCCGCTATGTAAGAAAGAGCGTT
TAAATAGACAGGCTAGCGTGTATGAGCTTCTATATGGAAGGGAAGTAAACGAAGTAATTAATGAAGTGAAAGGAAAGGAA
TTTCAATATGATTATGCACGACTAAGAGATGCAATTCGAAAAGGTATTGCGCTTGGGTATTTGTATTCACATGCGCTAGA
TGGGTGGGGGTCTTATTAA
TTGAATGAAATTGAACAATTAGCCACACGCATGATTCGTGAAGCATGTGAGATGAAGAGCTCGGATATTCACATTATCCC
TCGAGCTAGAGATGCCATAATTCAGCTAAGAGTTGATCAAGATTTGGTTGCTCATCAAACGCTCCAAAAAGAGGTATCTG
AACGACTCATTTCCCACTTTAAATTTTTAGGGAGCATGGATATTGGTGAAAGACGAAAGCCTCAAAATGGTGCACTGTCT
ACAACAATCGATCATATTAAAGTTAATCTACGTTTATCCACTTTACCTACATTGCAGGATGAAAGTCTCGTTATTCGTGT
ATTACCCCAAACGCAAACAACTTCTCTTAAATATTTATCACTTTTTCAAAATCATACCAAAAAACTTATTTCACTGCTTA
AGCATTCACATGGATTAATTGTGTTTACTGGGCCAACAGGATCCGGTAAAACAACAACTTTGTATACGTTACTTCATGAG
GTCAACCATTTATTAAATCGAAATGTCATTACGCTTGAAGATCCAATTGAACAGCAGAGTGAAAAAGTACTGCAGGTACA
AGTGAATGAACGAGCTGGCATCACGTATGCAACAGGTTTAAAAGCAATTTTACGTCATGACCCTGATATTATTATGGTCG
GGGAAATCCGCGACGCTGAAACAGCTCAAATTGCGGTTCGCGCAGCTTTAACCGGTCATTTAGTACTGACAACTATGCAT
ACGAAAGATACAAAAGGCTCTATTTATCGATTGCTTGAGTTTGGTGTTAGTATTCAAGAAATTGAACAAACGTTGGTAGC
CGTAGCTGCACAGCGATTAGTCGAAATAAAATGTAATTTTTGTGAAGGAAGATGTCATCCGCTATGTAAGAAAGAGCGTT
TAAATAGACAGGCTAGCGTGTATGAGCTTCTATATGGAAGGGAAGTAAACGAAGTAATTAATGAAGTGAAAGGAAAGGAA
TTTCAATATGATTATGCACGACTAAGAGATGCAATTCGAAAAGGTATTGCGCTTGGGTATTTGTATTCACATGCGCTAGA
TGGGTGGGGGTCTTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
60 |
99.432 |
0.597 |