Detailed information NTG0192190

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: BEN31_RS10390
• Genome accession: NZ_CP016784
• Coordinates: 1978232..1979194 (-)
• Length: 320 a.a.
• NCBI ID: WP_066031041.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain PDSLzg-1
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1973232..1984194

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BEN31_RS10360 (BEN31_10360)	-	1973388..1974368 (-)	981	WP_045210037.1	ABC transporter ATP-binding protein	-
BEN31_RS10365 (BEN31_10365)	-	1974537..1975331 (-)	795	WP_060595996.1	DUF2268 domain-containing protein	-
BEN31_RS10370 (BEN31_10370)	fabF	1975409..1976650 (-)	1242	WP_034663293.1	beta-ketoacyl-ACP synthase II	-
BEN31_RS10375 (BEN31_10375)	-	1976672..1977610 (-)	939	WP_066031040.1	beta-ketoacyl-ACP synthase III	-
BEN31_RS10380 (BEN31_10380)	-	1977780..1978013 (+)	234	WP_034663296.1	hypothetical protein	-
BEN31_RS10385 (BEN31_10385)	comZ	1978024..1978221 (-)	198	WP_003211983.1	ComZ family protein	Regulator
BEN31_RS10390 (BEN31_10390)	med	1978232..1979194 (-)	963	WP_066031041.1	BMP family ABC transporter substrate-binding protein	Regulator
BEN31_RS10395 (BEN31_10395)	-	1979285..1979860 (-)	576	WP_066031042.1	nad binding enzyme	-
BEN31_RS10400 (BEN31_10400)	-	1979936..1980676 (-)	741	WP_060595993.1	hypothetical protein	-
BEN31_RS10405 (BEN31_10405)	-	1980888..1981082 (+)	195	WP_003211779.1	YjzD family protein	-
BEN31_RS10410 (BEN31_10410)	-	1981201..1982466 (-)	1266	WP_034663308.1	MFS transporter	-
BEN31_RS10415 (BEN31_10415)	-	1982635..1982814 (-)	180	WP_034663316.1	YjzC family protein	-
BEN31_RS10420 (BEN31_10420)	argF	1982917..1983867 (-)	951	WP_034663317.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35755.64 Da
• Isoelectric Point: 5.2616

>NTDB_id=192190 BEN31_RS10390 WP_066031041.1 1978232..1979194(-) (med) [Bacillus pumilus strain PDSLzg-1]
MKYQRLFMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYTIIAKKFNEGKLNEQGDYSFDFKEGVIEMGKFSSTIDRAFVKDIESDIATYKKTGKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=192190 BEN31_RS10390 WP_066031041.1 1978232..1979194(-) (med) [Bacillus pumilus strain PDSLzg-1]
ATGAAGTATCAGCGGCTTTTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTAATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTCGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGTTTTTTCGGAGGCATGACAGCAGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGATGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAGCAGGGCGTAGATGTTGTATATCCAGCAG
GCGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACTGATCAATCC
AACCTCGGCAGTCATACCGTCTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTACACTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAACGAACAAGGTGACTACTCCTTTGATTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTGTGAAAGATATTGAAAGTGATATTGCGACTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	64.537	97.813	0.631