Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   BEK99_RS03630 Genome accession   NZ_CP016760
Coordinates   751966..753009 (+) Length   347 a.a.
NCBI ID   WP_065865302.1    Uniprot ID   -
Organism   Staphylococcus carnosus strain LTH 3730 SK 13 JCM 6069     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 746966..758009
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEK99_RS03605 (BEK99_03605) - 747941..748666 (+) 726 WP_015900709.1 type 1 glutamine amidotransferase -
  BEK99_RS03610 (BEK99_03610) - 748716..749703 (-) 988 Protein_720 FUSC family protein -
  BEK99_RS03615 (BEK99_03615) map 749955..750722 (+) 768 WP_065865301.1 type I methionyl aminopeptidase -
  BEK99_RS03620 (BEK99_03620) - 750856..751251 (+) 396 WP_015900706.1 hypothetical protein -
  BEK99_RS03625 (BEK99_03625) liaF 751267..751969 (+) 703 Protein_723 cell wall-active antibiotics response protein LiaF -
  BEK99_RS03630 (BEK99_03630) vraS 751966..753009 (+) 1044 WP_065865302.1 sensor histidine kinase Regulator
  BEK99_RS03635 (BEK99_03635) vraR 752999..753628 (+) 630 WP_065865303.1 response regulator transcription factor Regulator
  BEK99_RS03640 (BEK99_03640) - 753678..754256 (-) 579 WP_015900702.1 beta-class carbonic anhydrase -
  BEK99_RS03645 (BEK99_03645) - 754466..755542 (-) 1077 WP_065865304.1 YihY/virulence factor BrkB family protein -
  BEK99_RS03650 (BEK99_03650) - 755661..755957 (-) 297 WP_015900700.1 hypothetical protein -
  BEK99_RS03655 (BEK99_03655) - 755965..756429 (-) 465 WP_046100414.1 low molecular weight protein-tyrosine-phosphatase -
  BEK99_RS03660 (BEK99_03660) - 756665..756871 (+) 207 WP_015900698.1 DUF1128 family protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40135.63 Da        Isoelectric Point: 5.4382

>NTDB_id=191923 BEK99_RS03630 WP_065865302.1 751966..753009(+) (vraS) [Staphylococcus carnosus strain LTH 3730 SK 13 JCM 6069]
MNHYIRAIGSMLILIYSILAIFFFIDKVFVNIIFFQGMFYTQIFGIPVFLFLNIIVILMSIIVGSVLAYKVNQQNHWIKD
QIEHSIEGEVVGINDQHIELYQETLDIYHMLVPLNQELHRLRIKTQDLTNETYNLNDTKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPTLEKMIQDSQLEMRALLLHLRPLGLKDRSLGEGIKDLVVDLQKKVPMKVVYDI
EDFKVPKGIEDHLFRITQEGISNTLRHAEGSKLTIDLYNKDDYLLLRIQDDGKGFDIDEKMEKSYGLKNMRERALEIGAT
LHIVSLPGAGTRIEVKAPLNKEEFDDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=191923 BEK99_RS03630 WP_065865302.1 751966..753009(+) (vraS) [Staphylococcus carnosus strain LTH 3730 SK 13 JCM 6069]
ATGAACCATTATATAAGAGCTATAGGTTCAATGTTAATACTGATTTACAGTATTTTAGCCATATTCTTTTTCATTGATAA
AGTCTTTGTAAATATTATCTTTTTTCAAGGAATGTTCTATACACAAATTTTTGGGATTCCGGTATTTTTGTTTTTAAATA
TCATTGTGATACTTATGTCTATTATCGTAGGTTCTGTTTTAGCATATAAGGTCAACCAGCAAAACCACTGGATTAAAGAT
CAAATTGAACATTCAATTGAAGGTGAAGTAGTTGGAATAAATGATCAACATATCGAACTTTATCAAGAAACACTCGATAT
TTACCATATGCTAGTACCTTTAAACCAAGAATTACATCGCTTACGTATCAAGACACAAGATTTAACGAATGAAACTTATA
ATTTGAATGATACAAAAGTGAAGAAAATTATAGAAGATGAACGTCAGCGTTTGGCCAGAGAATTGCATGACTCAGTCAGT
CAGCAATTATTTGCTGCGAGTATGATGTTATCTGCTATTAAAGAAACGAAGTTAGAACCGCCTTTAGATCAGCAAATTCC
AACACTTGAAAAAATGATTCAAGATTCACAACTTGAAATGCGTGCTTTATTACTCCATTTGCGTCCGTTAGGCTTGAAGG
ATCGCTCATTAGGAGAAGGTATTAAAGACTTGGTTGTGGACTTGCAGAAAAAAGTGCCGATGAAAGTAGTATATGACATC
GAAGATTTTAAAGTACCAAAAGGGATTGAAGATCATTTATTTCGTATTACCCAAGAAGGTATTTCAAATACGCTAAGACA
TGCTGAAGGTTCAAAATTAACAATAGATTTATATAATAAAGACGATTACTTACTTTTACGTATTCAAGATGATGGTAAAG
GTTTTGATATAGATGAAAAAATGGAAAAAAGTTATGGATTAAAAAATATGCGAGAACGCGCATTAGAAATCGGAGCAACA
CTGCATATTGTATCATTGCCTGGTGCAGGGACAAGAATTGAAGTGAAAGCGCCGTTGAACAAGGAGGAATTCGATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

84.726

100

0.847


Multiple sequence alignment