Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   A6L50_RS10630 Genome accession   NZ_CP016680
Coordinates   2010579..2011223 (+) Length   214 a.a.
NCBI ID   WP_002226073.1    Uniprot ID   A0A378VTS6
Organism   Neisseria meningitidis strain M22822     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2005579..2016223
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L50_RS10605 (A6L50_10605) putP 2005786..2007312 (-) 1527 WP_002220352.1 sodium/proline symporter PutP -
  A6L50_RS10615 (A6L50_10615) - 2007795..2008115 (+) 321 WP_002216505.1 accessory factor UbiK family protein -
  A6L50_RS10620 (A6L50_10620) comM 2008129..2009625 (+) 1497 WP_002226071.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  A6L50_RS10625 (A6L50_10625) ftsN 2009731..2010576 (+) 846 WP_002226072.1 cell division protein FtsN -
  A6L50_RS10630 (A6L50_10630) dsbA1 2010579..2011223 (+) 645 WP_002226073.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  A6L50_RS10635 (A6L50_10635) - 2011256..2012077 (+) 822 WP_002226074.1 undecaprenyl-diphosphate phosphatase -
  A6L50_RS10650 (A6L50_10650) - 2012659..2013849 (-) 1191 WP_050584817.1 class I SAM-dependent methyltransferase -
  A6L50_RS10655 (A6L50_10655) mraZ 2014155..2014610 (+) 456 WP_002218779.1 division/cell wall cluster transcriptional repressor MraZ -
  A6L50_RS10660 (A6L50_10660) rsmH 2014607..2015593 (+) 987 WP_002229044.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  A6L50_RS10665 (A6L50_10665) ftsL 2015590..2015853 (+) 264 WP_002232818.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23967.99 Da        Isoelectric Point: 9.8294

>NTDB_id=191642 A6L50_RS10630 WP_002226073.1 2010579..2011223(+) (dsbA1) [Neisseria meningitidis strain M22822]
MKLKHLLPLLLSAVLSAQAYALTEREDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=191642 A6L50_RS10630 WP_002226073.1 2010579..2011223(+) (dsbA1) [Neisseria meningitidis strain M22822]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAAGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGTCGGGCAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCCAGGATGGCGGCTGCCGTCAATTTGTCGGGTTTGAAATATCAGGCAAA
CCCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGCCGCATTAAAAATGCAGAAA
CTGACGGAACAATACGGTATTGACAGCACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGACGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A378VTS6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

56.684

87.383

0.495
  dsbA2 Neisseria meningitidis MC58

51.075

86.916

0.444

Multiple sequence alignment