Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   A6L50_RS09995 Genome accession   NZ_CP016680
Coordinates   1896508..1897203 (+) Length   231 a.a.
NCBI ID   WP_002234519.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M22822     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1891508..1902203
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L50_RS09975 (A6L50_09975) - 1892130..1892528 (+) 399 WP_002241055.1 DoxX family protein -
  A6L50_RS09980 (A6L50_09980) - 1892578..1893183 (+) 606 WP_002241056.1 nitroreductase family protein -
  A6L50_RS09985 (A6L50_09985) - 1893369..1895480 (+) 2112 WP_002258457.1 TonB-dependent receptor -
  A6L50_RS09990 (A6L50_09990) - 1895678..1896337 (+) 660 WP_002218694.1 NYN domain-containing protein -
  A6L50_RS09995 (A6L50_09995) dsbA2 1896508..1897203 (+) 696 WP_002234519.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  A6L50_RS10000 (A6L50_10000) ffh 1897534..1898904 (-) 1371 WP_002258651.1 signal recognition particle protein -
  A6L50_RS10005 (A6L50_10005) - 1899124..1899930 (+) 807 WP_002221447.1 cytochrome C assembly family protein -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25447.95 Da        Isoelectric Point: 5.1502

>NTDB_id=191637 A6L50_RS09995 WP_002234519.1 1896508..1897203(+) (dsbA2) [Neisseria meningitidis strain M22822]
MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAELNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=191637 A6L50_RS09995 WP_002234519.1 1896508..1897203(+) (dsbA2) [Neisseria meningitidis strain M22822]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGTCCAAAGCAGCTCATCTGCTCCGGCAGCCCCTGCTGAGTTGAACGAAGGTGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATTGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

99.567

100

0.996

  dsbA1 Neisseria meningitidis MC58

70.815

100

0.714


Multiple sequence alignment