Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | A6L97_RS09970 | Genome accession | NZ_CP016666 |
| Coordinates | 1918061..1918660 (+) | Length | 199 a.a. |
| NCBI ID | WP_002221479.1 | Uniprot ID | A1KS89 |
| Organism | Neisseria meningitidis strain M25462 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1913061..1923660
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6L97_RS09955 (A6L97_09955) | yihA | 1913645..1914274 (+) | 630 | WP_002217904.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| A6L97_RS09960 (A6L97_09960) | - | 1914395..1916791 (-) | 2397 | WP_002221477.1 | penicillin-binding protein 1A | - |
| A6L97_RS09965 (A6L97_09965) | pilM | 1916943..1918058 (+) | 1116 | WP_002214517.1 | type IV pilus biogenesis protein PilM | - |
| A6L97_RS09970 (A6L97_09970) | pilN | 1918061..1918660 (+) | 600 | WP_002221479.1 | PilN domain-containing protein | Machinery gene |
| A6L97_RS09975 (A6L97_09975) | - | 1918661..1919308 (+) | 648 | WP_002217908.1 | type 4a pilus biogenesis protein PilO | - |
| A6L97_RS09980 (A6L97_09980) | pilP | 1919326..1919871 (+) | 546 | WP_002214522.1 | pilus assembly protein PilP | Machinery gene |
| A6L97_RS09985 (A6L97_09985) | pilQ | 1919890..1922175 (+) | 2286 | WP_002214524.1 | type IV pilus secretin PilQ | Machinery gene |
| A6L97_RS09990 (A6L97_09990) | - | 1923137..1923649 (+) | 513 | WP_002214526.1 | shikimate kinase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22243.45 Da Isoelectric Point: 9.5493
>NTDB_id=190991 A6L97_RS09970 WP_002221479.1 1918061..1918660(+) (pilN) [Neisseria meningitidis strain M25462]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKVEELQLKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKVEELQLKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
Nucleotide
Download Length: 600 bp
>NTDB_id=190991 A6L97_RS09970 WP_002221479.1 1918061..1918660(+) (pilN) [Neisseria meningitidis strain M25462]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAACCAGT
CGGAAAGAAACACGCTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAGTCGAGGAGCTCCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCCATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAACCAGT
CGGAAAGAAACACGCTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAGTCGAGGAGCTCCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCCATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
99.497 |
100 |
0.995 |