Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | CAH07_RS17720 | Genome accession | NZ_CP021123 |
| Coordinates | 3392718..3393848 (-) | Length | 376 a.a. |
| NCBI ID | WP_029317429.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SEM-9 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3387718..3398848
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAH07_RS17675 (CAH07_17490) | cotJC | 3387814..3388383 (-) | 570 | WP_003233850.1 | spore coat protein CotJC | - |
| CAH07_RS17680 (CAH07_17495) | cotJB | 3388398..3388661 (-) | 264 | WP_003219491.1 | spore coat protein CotJB | - |
| CAH07_RS17685 (CAH07_17500) | cotJA | 3388645..3388893 (-) | 249 | WP_003219489.1 | spore coat-associated protein CotJA | - |
| CAH07_RS17690 (CAH07_17505) | yesF | 3389019..3389887 (-) | 869 | Protein_3458 | NAD-dependent epimerase/dehydratase family protein | - |
| CAH07_RS17695 (CAH07_17510) | yesE | 3389884..3390327 (-) | 444 | WP_003233857.1 | nuclear transport factor 2 family protein | - |
| CAH07_RS17700 (CAH07_17515) | yezE | 3390406..3390990 (-) | 585 | WP_003243181.1 | TetR/AcrR family transcriptional regulator | - |
| CAH07_RS17705 (CAH07_17520) | yeeK | 3391105..3391542 (-) | 438 | WP_003244206.1 | spore coat protein YeeK | - |
| CAH07_RS17710 (CAH07_17525) | yeeI | 3391676..3392395 (-) | 720 | WP_003233863.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| CAH07_RS17715 (CAH07_17530) | phrH | 3392555..3392728 (-) | 174 | WP_029317430.1 | phosphatase RapH inhibitor PhrH | - |
| CAH07_RS17720 (CAH07_17535) | rapC | 3392718..3393848 (-) | 1131 | WP_029317429.1 | response regulator aspartate phosphatase RapH | Regulator |
| CAH07_RS17725 (CAH07_17540) | - | 3394013..3394855 (-) | 843 | WP_224913002.1 | hypothetical protein | - |
| CAH07_RS17730 (CAH07_17545) | - | 3394999..3396015 (-) | 1017 | WP_029317427.1 | hypothetical protein | - |
| CAH07_RS17735 (CAH07_17550) | - | 3396228..3398114 (+) | 1887 | WP_029317426.1 | T7SS effector LXG polymorphic toxin | - |
| CAH07_RS17740 (CAH07_17555) | - | 3398127..3398522 (+) | 396 | WP_029317425.1 | immunity 22 family protein | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 43998.26 Da Isoelectric Point: 5.5861
>NTDB_id=190595 CAH07_RS17720 WP_029317429.1 3392718..3393848(-) (rapC) [Bacillus subtilis strain SEM-9]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLETALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQNNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLETALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
Nucleotide
Download Length: 1131 bp
>NTDB_id=190595 CAH07_RS17720 WP_029317429.1 3392718..3393848(-) (rapC) [Bacillus subtilis strain SEM-9]
TTGAGTCAAGCCATACCGTCTTCGCGTGTAGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGATTCTGAAAGCGGAGGTTGAGCAGGACATTCAGCAGATGGAAGAAGACCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGGCACCAGCTGATGCTTGATTATTTGGAGCCGGGACAAACATACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCTTTAGACATTTATCAAAACAATCCCCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
TGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGACGGCGCTGGAATTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGACGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCTTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
TTGAGTCAAGCCATACCGTCTTCGCGTGTAGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGATTCTGAAAGCGGAGGTTGAGCAGGACATTCAGCAGATGGAAGAAGACCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGGCACCAGCTGATGCTTGATTATTTGGAGCCGGGACAAACATACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCTTTAGACATTTATCAAAACAATCCCCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
TGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGACGGCGCTGGAATTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGACGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCTTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.691 |
100 |
0.407 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
39.788 |
100 |
0.399 |