Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   CAH07_RS00360 Genome accession   NZ_CP021123
Coordinates   61296..62090 (+) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain SEM-9     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 56296..67090
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAH07_RS00340 (CAH07_00330) walR 56538..57245 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  CAH07_RS00345 (CAH07_00335) walK 57253..59088 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  CAH07_RS00350 (CAH07_00340) walH 59078..60445 (+) 1368 WP_029318541.1 WalRK two-component regulatory system regulator WalH -
  CAH07_RS00355 (CAH07_00345) walI 60432..61274 (+) 843 WP_029318542.1 WalRK two-component regulatory system regulator WalI -
  CAH07_RS00360 (CAH07_00350) vicX 61296..62090 (+) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  CAH07_RS00365 (CAH07_00355) htrA 62172..63374 (+) 1203 WP_015250812.1 serine protease HtrC Regulator
  CAH07_RS00370 - 63394..63524 (+) 131 Protein_69 hypothetical protein -
  CAH07_RS00375 (CAH07_00360) - 63521..64021 (-) 501 WP_029318543.1 PepSY domain-containing protein -
  CAH07_RS00380 (CAH07_00365) - 64182..65081 (-) 900 WP_029318544.1 PepSY domain-containing protein -
  CAH07_RS00385 (CAH07_00370) - 65293..65976 (+) 684 WP_024573086.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=190473 CAH07_RS00360 WP_003226939.1 61296..62090(+) (vicX) [Bacillus subtilis strain SEM-9]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=190473 CAH07_RS00360 WP_003226939.1 61296..62090(+) (vicX) [Bacillus subtilis strain SEM-9]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AACGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTAAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGGAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCCGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53

Multiple sequence alignment