Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | A6M06_RS09840 | Genome accession | NZ_CP016651 |
| Coordinates | 1896864..1897463 (+) | Length | 199 a.a. |
| NCBI ID | WP_002221479.1 | Uniprot ID | A1KS89 |
| Organism | Neisseria meningitidis strain M25474 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1891864..1902463
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6M06_RS09825 (A6M06_09825) | yihA | 1892448..1893077 (+) | 630 | WP_002217904.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| A6M06_RS09830 (A6M06_09830) | - | 1893198..1895594 (-) | 2397 | WP_002221477.1 | penicillin-binding protein 1A | - |
| A6M06_RS09835 (A6M06_09835) | pilM | 1895746..1896861 (+) | 1116 | WP_002214517.1 | type IV pilus biogenesis protein PilM | - |
| A6M06_RS09840 (A6M06_09840) | pilN | 1896864..1897463 (+) | 600 | WP_002221479.1 | PilN domain-containing protein | Machinery gene |
| A6M06_RS09845 (A6M06_09845) | - | 1897464..1898111 (+) | 648 | WP_002217908.1 | type 4a pilus biogenesis protein PilO | - |
| A6M06_RS09850 (A6M06_09850) | pilP | 1898129..1898674 (+) | 546 | WP_002214522.1 | pilus assembly protein PilP | Machinery gene |
| A6M06_RS09855 (A6M06_09855) | pilQ | 1898693..1900978 (+) | 2286 | WP_002214524.1 | type IV pilus secretin PilQ | Machinery gene |
| A6M06_RS09860 (A6M06_09860) | - | 1901940..1902452 (+) | 513 | WP_002214526.1 | shikimate kinase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22243.45 Da Isoelectric Point: 9.5493
>NTDB_id=190287 A6M06_RS09840 WP_002221479.1 1896864..1897463(+) (pilN) [Neisseria meningitidis strain M25474]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKVEELQLKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKVEELQLKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
Nucleotide
Download Length: 600 bp
>NTDB_id=190287 A6M06_RS09840 WP_002221479.1 1896864..1897463(+) (pilN) [Neisseria meningitidis strain M25474]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAACCAGT
CGGAAAGAAACACGCTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAGTCGAGGAGCTCCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCCATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAACCAGT
CGGAAAGAAACACGCTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAGTCGAGGAGCTCCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCCATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
99.497 |
100 |
0.995 |