Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   B9L64_RS08290 Genome accession   NZ_CP020915
Coordinates   1618897..1619760 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain 50-1     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1613897..1624760
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B9L64_RS08255 mrpE 1614063..1614539 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  B9L64_RS08260 mrpF 1614539..1614823 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  B9L64_RS08265 mnhG 1614807..1615181 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  B9L64_RS08270 yuxO 1615222..1615602 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  B9L64_RS08275 comA 1615621..1616265 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  B9L64_RS08280 comP 1616346..1618658 (-) 2313 WP_041332996.1 sensor histidine kinase Regulator
  B9L64_RS08285 comX 1618674..1618895 (-) 222 WP_014480704.1 competence pheromone ComX -
  B9L64_RS08290 comQ 1618897..1619760 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  B9L64_RS08295 degQ 1619945..1620085 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  B9L64_RS21030 - 1620307..1620432 (+) 126 WP_003228793.1 hypothetical protein -
  B9L64_RS08300 - 1620547..1620915 (+) 369 WP_046381300.1 hypothetical protein -
  B9L64_RS08305 pdeH 1620891..1622120 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -
  B9L64_RS08310 pncB 1622257..1623729 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  B9L64_RS08315 pncA 1623745..1624296 (-) 552 WP_014477836.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=189796 B9L64_RS08290 WP_014480705.1 1618897..1619760(-) (comQ) [Bacillus subtilis strain 50-1]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=189796 B9L64_RS08290 WP_014480705.1 1618897..1619760(-) (comQ) [Bacillus subtilis strain 50-1]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439

Multiple sequence alignment