Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   A6L32_RS10630 Genome accession   NZ_CP016627
Coordinates   2058119..2058730 (-) Length   203 a.a.
NCBI ID   WP_002248273.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M22718     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 2053119..2063730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6L32_RS10610 (A6L32_10610) - 2053647..2054075 (+) 429 Protein_1982 AzlC family ABC transporter permease -
  A6L32_RS10615 (A6L32_10615) pilX 2056134..2056607 (-) 474 WP_002248276.1 PilX family type IV pilin Machinery gene
  A6L32_RS10620 (A6L32_10620) pilK 2056612..2057205 (-) 594 WP_002248275.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  A6L32_RS10625 (A6L32_10625) pilJ 2057184..2058122 (-) 939 WP_002248274.1 PilW family protein Machinery gene
  A6L32_RS10630 (A6L32_10630) pilV 2058119..2058730 (-) 612 WP_002248273.1 type IV pilus modification protein PilV Machinery gene
  A6L32_RS10635 (A6L32_10635) pilH 2058754..2059431 (-) 678 WP_002248272.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  A6L32_RS10640 (A6L32_10640) dnaB 2059586..2060992 (-) 1407 WP_002248271.1 replicative DNA helicase -
  A6L32_RS10645 (A6L32_10645) - 2061155..2061742 (+) 588 WP_002220670.1 superoxide dismutase -
  A6L32_RS10650 (A6L32_10650) - 2062314..2062823 (-) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -
  A6L32_RS10655 (A6L32_10655) - 2063155..2063487 (-) 333 WP_002226445.1 hypothetical protein -
  A6L32_RS14875 - 2063532..2063639 (-) 108 Protein_1992 IS5/IS1182 family transposase -

Sequence

Protein


Download         Length: 203 a.a.        Molecular weight: 22100.14 Da        Isoelectric Point: 4.8335

>NTDB_id=189796 A6L32_RS10630 WP_002248273.1 2058119..2058730(-) (pilV) [Neisseria meningitidis strain M22718]
MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMRNHTLSAVDGDFAIDAIKTKAQLAEEQLKRFSYELKNALPDAAAIRYAVCKDSLGAAPTLSAGSTFSPNCDNKAN
GDTLIKVLWVNDSAGDSDIARTNLEVSGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 612 bp        

>NTDB_id=189796 A6L32_RS10630 WP_002248273.1 2058119..2058730(-) (pilV) [Neisseria meningitidis strain M22718]
ATGAAGAATAATGATTGCTTCCGCCTGAAAGATTCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTTGCTATGCTCGT
TCTGACCATCGGTATTTTGGCGTTACTGTCTGTGCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGAGAAACCATACACTATCAGCTGTGGATGGCGATTTTGCGATTGATGCCATAAAAACTAAGGCGCA
GTTGGCAGAGGAACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCATCCGTTACGCCG
TCTGCAAGGATTCGTTGGGTGCTGCGCCGACATTGTCCGCCGGCAGTACTTTTTCTCCAAATTGCGATAATAAGGCAAAC
GGAGATACTTTAATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATCGCCCGTACGAATCTTGAGGTGAG
CGGCGACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(12-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

91.304

100

0.931
  pilI Neisseria gonorrhoeae MS11

82.266

100

0.823
  pilV Neisseria gonorrhoeae MS11

82.266

100

0.823

Multiple sequence alignment