Detailed information NTG0189737

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: B9L64_RS00495
• Genome accession: NZ_CP020915
• Coordinates: 89367..90392 (+)
• Length: 341 a.a.
• NCBI ID: WP_003245451.1
• Uniprot ID: O34470
• Organism: Bacillus subtilis strain 50-1
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 84367..95392

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B9L64_RS00460	ylbE	84667..84906 (+)	240	WP_003232231.1	YlbE-like family protein	-
B9L64_RS00465	ylbF	85022..85471 (+)	450	WP_003221370.1	regulatory iron-sulfur-containing complex subunit RicF	Regulator
B9L64_RS00470	ylbG	85526..85798 (+)	273	WP_015715839.1	YlbG family protein	-
B9L64_RS00475	rsmD	86121..86675 (+)	555	WP_029317761.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
B9L64_RS00480	coaD	86680..87165 (+)	486	WP_003245283.1	pantetheine-phosphate adenylyltransferase	-
B9L64_RS00485	spoVV	87176..88402 (-)	1227	WP_015252149.1	dipicolinic acid transporter SpoVV	-
B9L64_RS00490	ylbK	88583..89365 (+)	783	WP_003232221.1	patatin family protein	-
B9L64_RS00495	sepM	89367..90392 (+)	1026	WP_003245451.1	protease DdcP	Regulator
B9L64_RS00500	tmcAL	90409..91656 (-)	1248	WP_003244707.1	nucleotidyltransferase	-
B9L64_RS00505	-	91653..91838 (-)	186	WP_003232215.1	hypothetical protein	-
B9L64_RS00510	ylbN	91866..92384 (+)	519	WP_110109387.1	DUF177 domain-containing protein	-
B9L64_RS00515	rpmF	92406..92585 (+)	180	WP_003154457.1	50S ribosomal protein L32	-
B9L64_RS00520	gerR	92731..93312 (+)	582	WP_003232210.1	sporulation specific transcriptional regulator GerR	-
B9L64_RS00525	ylbP	93369..93851 (-)	483	WP_003244940.1	N-acetyltransferase	-
B9L64_RS00530	panEA	94011..94907 (+)	897	WP_069322576.1	2-dehydropantoate 2-reductase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37651.23 Da
• Isoelectric Point: 6.5347

>NTDB_id=189737 B9L64_RS00495 WP_003245451.1 89367..90392(+) (sepM) [Bacillus subtilis strain 50-1]
MLRKKHFSWMLVILILIAVLSFIKLPYYITKPGEATELASLIKVEGGYPEKGSLSLMTVKVGPANPFTYVWAKMHPYYEI
VPDESIKEEGESDKEYMKRQLQMMKSSQENAVIAAYQKAGKKVSYSFNGIYASSVVENMPAKGKIEVGDKIISADGKNYQ
SAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPDEPDRAGIGVSLYTDRNVKVEPDIDFEIENIGGPSAGLMMS
LEIYNQLTKPDETKGYDIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGASNSDYKNAVKTAKDIDSNMKI
VPVDTMQDAIDYLNKLKAKST

Nucleotide

• Length: 1026 bp

>NTDB_id=189737 B9L64_RS00495 WP_003245451.1 89367..90392(+) (sepM) [Bacillus subtilis strain 50-1]
TTGCTACGTAAAAAACATTTTAGCTGGATGCTCGTCATCCTCATACTGATCGCCGTTTTATCATTTATAAAACTTCCATA
CTATATTACAAAACCGGGAGAAGCGACAGAGCTTGCTTCATTGATAAAAGTGGAGGGAGGCTACCCGGAAAAAGGAAGTC
TGTCCTTAATGACTGTTAAAGTGGGACCGGCTAATCCATTTACATATGTGTGGGCAAAGATGCACCCTTATTATGAAATT
GTTCCTGATGAGAGCATTAAGGAGGAAGGCGAATCAGATAAGGAGTATATGAAAAGACAGCTCCAAATGATGAAAAGCTC
GCAAGAAAATGCGGTTATAGCCGCCTATCAAAAGGCAGGAAAAAAAGTCAGCTATTCCTTTAACGGCATATACGCAAGCT
CAGTTGTAGAAAACATGCCGGCAAAAGGGAAAATAGAAGTCGGTGATAAAATCATCAGCGCAGACGGCAAAAACTATCAG
TCTGCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGAGATAAAGTCACGTTAAAGATCGAAAGAGAAGAAAA
AGAAAAGCGTGTCACCCTTACGTTAAAACAATTTCCTGATGAGCCGGATCGGGCAGGAATCGGAGTTTCGCTTTATACAG
ACAGAAACGTGAAGGTAGAGCCTGATATTGATTTTGAAATCGAAAATATTGGCGGCCCGTCAGCAGGGTTAATGATGTCC
CTTGAAATCTATAATCAGCTGACAAAACCAGACGAAACAAAAGGCTACGATATTGCGGGAACAGGTACGATTGATGTTGA
CGGAAAAGTAGGCCCGATCGGCGGCATTGATCAAAAAGTCGTCGCCGCAGACAAAGCCGGAAAAGACATTTTCTTCGCGC
CAAATCAAAACGGCGCCAGCAATTCCGATTATAAGAACGCAGTAAAAACAGCAAAAGATATTGATTCAAATATGAAGATT
GTGCCTGTTGATACCATGCAGGATGCGATTGATTATTTGAATAAGCTGAAAGCGAAAAGCACCTGA

Domains

Predicted by InterProScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (232-331)

• Peptidase family M50 (Peptidase_M50) (59-220)

• PDZ domain (PDZ_2) (128-195)

3D structure

• PDB: 2KJP

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	39.143	100	0.402