Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | A6A11_RS08445 | Genome accession | NZ_CP016605 |
| Coordinates | 1828887..1829255 (+) | Length | 122 a.a. |
| NCBI ID | WP_132024231.1 | Uniprot ID | A0A4R2MTS6 |
| Organism | Bisgaardia hudsonensis strain M327/99/2 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1823887..1834255
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6A11_RS08410 (A6A11_08305) | rlmB | 1823947..1824684 (+) | 738 | WP_132024216.1 | 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB | - |
| A6A11_RS08415 (A6A11_08310) | folA | 1824740..1825225 (-) | 486 | WP_132024218.1 | type 3 dihydrofolate reductase | - |
| A6A11_RS08420 (A6A11_08315) | - | 1825305..1825772 (-) | 468 | WP_132024221.1 | threonine/serine exporter family protein | - |
| A6A11_RS08425 (A6A11_08320) | - | 1825774..1826562 (-) | 789 | WP_132024223.1 | threonine/serine ThrE exporter family protein | - |
| A6A11_RS08430 (A6A11_08325) | proB | 1826718..1827827 (+) | 1110 | WP_132024225.1 | glutamate 5-kinase | - |
| A6A11_RS08435 (A6A11_08330) | - | 1827827..1828171 (+) | 345 | WP_132024227.1 | hypothetical protein | - |
| A6A11_RS08440 (A6A11_08335) | - | 1828215..1828646 (-) | 432 | WP_132024229.1 | hypothetical protein | - |
| A6A11_RS08445 (A6A11_08340) | comE1/comEA | 1828887..1829255 (+) | 369 | WP_132024231.1 | ComEA family DNA-binding protein | Machinery gene |
| A6A11_RS08450 (A6A11_08345) | rdgB | 1829375..1829980 (+) | 606 | WP_132024233.1 | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | - |
| A6A11_RS08455 (A6A11_08350) | - | 1829982..1830305 (+) | 324 | WP_132024235.1 | YbjQ family protein | - |
| A6A11_RS08460 (A6A11_08355) | hemW | 1830306..1831460 (+) | 1155 | WP_132024237.1 | radical SAM family heme chaperone HemW | - |
| A6A11_RS08465 (A6A11_08360) | rpiA | 1831552..1832211 (+) | 660 | WP_132024239.1 | ribose-5-phosphate isomerase RpiA | - |
| A6A11_RS08470 (A6A11_08365) | serA | 1832238..1833470 (+) | 1233 | WP_132024241.1 | phosphoglycerate dehydrogenase | - |
Sequence
Protein
Download Length: 122 a.a. Molecular weight: 13306.30 Da Isoelectric Point: 9.8834
>NTDB_id=189612 A6A11_RS08445 WP_132024231.1 1828887..1829255(+) (comE1/comEA) [Bisgaardia hudsonensis strain M327/99/2]
MSKFKSILASLFIISTLALSNQVLADNAQTKVEKSSSKITTVQENKKSIDKNDPIILSDKVNINTATASEIQQALTGIGE
KKAIAIVAYRQENGNFTDIEQLTEVKGIGKATLEKNKDRIIL
MSKFKSILASLFIISTLALSNQVLADNAQTKVEKSSSKITTVQENKKSIDKNDPIILSDKVNINTATASEIQQALTGIGE
KKAIAIVAYRQENGNFTDIEQLTEVKGIGKATLEKNKDRIIL
Nucleotide
Download Length: 369 bp
>NTDB_id=189612 A6A11_RS08445 WP_132024231.1 1828887..1829255(+) (comE1/comEA) [Bisgaardia hudsonensis strain M327/99/2]
ATGTCAAAATTTAAATCAATATTAGCATCATTATTCATTATCAGTACCCTCGCACTATCTAATCAAGTTCTTGCGGATAA
TGCACAAACCAAAGTTGAAAAAAGTTCATCTAAAATAACCACAGTTCAAGAAAATAAGAAATCTATTGATAAAAATGATC
CAATTATTCTTTCAGATAAAGTAAATATTAACACGGCGACTGCAAGTGAAATTCAACAAGCATTAACTGGTATTGGAGAA
AAAAAAGCAATAGCGATTGTTGCTTACCGACAAGAAAATGGCAATTTTACGGATATTGAGCAATTAACCGAAGTAAAAGG
TATCGGCAAAGCCACTTTAGAAAAAAATAAGGATCGTATTATTTTATAA
ATGTCAAAATTTAAATCAATATTAGCATCATTATTCATTATCAGTACCCTCGCACTATCTAATCAAGTTCTTGCGGATAA
TGCACAAACCAAAGTTGAAAAAAGTTCATCTAAAATAACCACAGTTCAAGAAAATAAGAAATCTATTGATAAAAATGATC
CAATTATTCTTTCAGATAAAGTAAATATTAACACGGCGACTGCAAGTGAAATTCAACAAGCATTAACTGGTATTGGAGAA
AAAAAAGCAATAGCGATTGTTGCTTACCGACAAGAAAATGGCAATTTTACGGATATTGAGCAATTAACCGAAGTAAAAGG
TATCGGCAAAGCCACTTTAGAAAAAAATAAGGATCGTATTATTTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
49.58 |
97.541 |
0.484 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.863 |
95.902 |
0.459 |