Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   BCM43_RS22610 Genome accession   NZ_CP016588
Coordinates   4450088..4450771 (-) Length   227 a.a.
NCBI ID   WP_000350716.1    Uniprot ID   A0A9W5VN71
Organism   Bacillus thuringiensis strain KNU-07     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 4445088..4455771
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BCM43_RS22595 (BCM43_22595) pepF 4445269..4447095 (-) 1827 WP_000003366.1 oligoendopeptidase F Regulator
  BCM43_RS22600 (BCM43_22600) - 4447146..4448390 (-) 1245 WP_000628332.1 competence protein CoiA family protein -
  BCM43_RS22605 (BCM43_22605) - 4448471..4450015 (-) 1545 WP_000799198.1 cardiolipin synthase -
  BCM43_RS22610 (BCM43_22610) mecA 4450088..4450771 (-) 684 WP_000350716.1 adaptor protein MecA Regulator
  BCM43_RS22615 (BCM43_22615) - 4451117..4451791 (+) 675 WP_000362615.1 TerC family protein -
  BCM43_RS22620 (BCM43_22620) spx 4451841..4452236 (-) 396 WP_000258267.1 transcriptional regulator Spx -
  BCM43_RS22625 (BCM43_22625) - 4452830..4453033 (+) 204 WP_000559971.1 hypothetical protein -
  BCM43_RS22630 (BCM43_22630) - 4453063..4454709 (-) 1647 WP_000727250.1 peptide ABC transporter substrate-binding protein -

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27009.07 Da        Isoelectric Point: 3.9986

>NTDB_id=189435 BCM43_RS22610 WP_000350716.1 4450088..4450771(-) (mecA) [Bacillus thuringiensis strain KNU-07]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=189435 BCM43_RS22610 WP_000350716.1 4450088..4450771(-) (mecA) [Bacillus thuringiensis strain KNU-07]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAGATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGGCAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564


Multiple sequence alignment