Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | BA953_RS11475 | Genome accession | NZ_CP016556 |
| Coordinates | 2483269..2483874 (-) | Length | 201 a.a. |
| NCBI ID | WP_065741176.1 | Uniprot ID | - |
| Organism | Vibrio coralliilyticus strain 58 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2478269..2488874
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BA953_RS11465 (BA953_11465) | aceF | 2479563..2481464 (+) | 1902 | WP_065741174.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| BA953_RS11470 (BA953_11470) | lpdA | 2481720..2483150 (+) | 1431 | WP_065741175.1 | dihydrolipoyl dehydrogenase | - |
| BA953_RS11475 (BA953_11475) | opaR | 2483269..2483874 (-) | 606 | WP_065741176.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| BA953_RS11480 (BA953_11480) | hpt | 2484181..2484711 (+) | 531 | WP_065741177.1 | hypoxanthine phosphoribosyltransferase | - |
| BA953_RS11485 (BA953_11485) | can | 2484769..2485428 (-) | 660 | WP_006958120.1 | carbonate dehydratase | - |
| BA953_RS11490 (BA953_11490) | - | 2485783..2487453 (+) | 1671 | WP_045986972.1 | SulP family inorganic anion transporter | - |
| BA953_RS11495 (BA953_11495) | - | 2487654..2488568 (+) | 915 | WP_021457059.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 23190.37 Da Isoelectric Point: 5.0611
>NTDB_id=189168 BA953_RS11475 WP_065741176.1 2483269..2483874(-) (opaR) [Vibrio coralliilyticus strain 58]
MDSIAKRPRTRLSPQKCKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNYVVRQFSNFLS
DNIDLDIHAKENLRNLTSAMVDLVVNDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDDHDPA
DLATLFHGICYSLFVQANRTQDDESVNRLTQSYLDMLCIYK
MDSIAKRPRTRLSPQKCKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLNYVVRQFSNFLS
DNIDLDIHAKENLRNLTSAMVDLVVNDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDDHDPA
DLATLFHGICYSLFVQANRTQDDESVNRLTQSYLDMLCIYK
Nucleotide
Download Length: 606 bp
>NTDB_id=189168 BA953_RS11475 WP_065741176.1 2483269..2483874(-) (opaR) [Vibrio coralliilyticus strain 58]
ATGGATTCTATAGCTAAGAGACCGCGTACGCGTCTTTCACCGCAAAAATGTAAACAACAACTGATGGAAATCGCATTAGA
GGTGTTTGCTCGTCGTGGTATTGGTCGCGGTGGTCATGCTGACATTGCAGAAATCGCTCAGGTTTCTGTTGCTACTGTTT
TTAACTACTTCCCAACCCGCGAAGACTTGGTTGATGATGTACTTAACTACGTAGTTCGTCAGTTCTCAAACTTCCTATCA
GATAATATCGATCTTGATATTCATGCAAAAGAAAACCTACGCAACCTAACTTCGGCAATGGTTGACCTTGTTGTCAACGA
CTGCCACTGGCTTAAAGTTTGGTTCGAGTGGAGTGCATCGACACGTGATGAAGTATGGCCGCTGTTTGTTACCACAAACC
GCACCAACCAGCTTCTAGTTCAGAACATGTTTATCAAAGCAATCGAGCGCGGTGAAGTATGTGATGATCACGACCCAGCA
GACCTAGCGACACTATTCCACGGCATCTGCTACTCATTGTTTGTCCAGGCTAACCGTACTCAAGATGATGAGTCTGTAAA
CCGCCTGACACAAAGCTACCTAGATATGCTTTGCATCTACAAGTAG
ATGGATTCTATAGCTAAGAGACCGCGTACGCGTCTTTCACCGCAAAAATGTAAACAACAACTGATGGAAATCGCATTAGA
GGTGTTTGCTCGTCGTGGTATTGGTCGCGGTGGTCATGCTGACATTGCAGAAATCGCTCAGGTTTCTGTTGCTACTGTTT
TTAACTACTTCCCAACCCGCGAAGACTTGGTTGATGATGTACTTAACTACGTAGTTCGTCAGTTCTCAAACTTCCTATCA
GATAATATCGATCTTGATATTCATGCAAAAGAAAACCTACGCAACCTAACTTCGGCAATGGTTGACCTTGTTGTCAACGA
CTGCCACTGGCTTAAAGTTTGGTTCGAGTGGAGTGCATCGACACGTGATGAAGTATGGCCGCTGTTTGTTACCACAAACC
GCACCAACCAGCTTCTAGTTCAGAACATGTTTATCAAAGCAATCGAGCGCGGTGAAGTATGTGATGATCACGACCCAGCA
GACCTAGCGACACTATTCCACGGCATCTGCTACTCATTGTTTGTCCAGGCTAACCGTACTCAAGATGATGAGTCTGTAAA
CCGCCTGACACAAAGCTACCTAGATATGCTTTGCATCTACAAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
84.5 |
99.502 |
0.841 |
| hapR | Vibrio cholerae C6706 |
75.879 |
99.005 |
0.751 |
| hapR | Vibrio cholerae strain A1552 |
75.879 |
99.005 |
0.751 |