Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   BB562_RS07790 Genome accession   NZ_CP016491
Coordinates   1620476..1621753 (+) Length   425 a.a.
NCBI ID   WP_088771159.1    Uniprot ID   A0A241RT34
Organism   Lactiplantibacillus pentosus strain BGM48     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1615476..1626753
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BB562_RS07765 (BB562_07465) - 1615927..1617189 (-) 1263 WP_101872633.1 ISL3 family transposase -
  BB562_RS07770 (BB562_07470) pyrH 1617452..1618174 (+) 723 WP_003638967.1 UMP kinase -
  BB562_RS07775 (BB562_07475) frr 1618176..1618739 (+) 564 WP_003638966.1 ribosome recycling factor -
  BB562_RS07780 (BB562_07480) - 1618859..1619638 (+) 780 WP_101873374.1 isoprenyl transferase -
  BB562_RS07785 (BB562_07485) - 1619654..1620439 (+) 786 WP_050338486.1 phosphatidate cytidylyltransferase -
  BB562_RS07790 (BB562_07490) eeP 1620476..1621753 (+) 1278 WP_088771159.1 RIP metalloprotease RseP Regulator
  BB562_RS07795 (BB562_07495) - 1621792..1623501 (+) 1710 WP_101873375.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 46230.85 Da        Isoelectric Point: 10.0234

>NTDB_id=188562 BB562_RS07790 WP_088771159.1 1620476..1621753(+) (eeP) [Lactiplantibacillus pentosus strain BGM48]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGQDGIVHSINASKKTTLFNGIPLSVTATDLERELWIEGYENGDESEVKRYSVDHDATIIESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTNVAATTANSVARQAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLRLTIKRDGQTKKITVTPAAKTVSGNRIGQIGVMWATKTDKSFGAKLAYGFTGSWNITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGLRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=188562 BB562_RS07790 WP_088771159.1 1620476..1621753(+) (eeP) [Lactiplantibacillus pentosus strain BGM48]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTTATCGTCCATGAATTTGGGCACTTCTATTTTGC
CAAAAAGGCTGGGATTTTGGTGCGTGAATTTTCTGTTGGGATGGGACCCAAGGCAGTTGCGTTTCGGCGGAATGCGACGA
CTTATACGTTACGTTTCTTGCCAATTGGTGGGTACGTGCGGATGGCCGGAGTCGCTGACGATGAAGATGAGGAACTGAAA
CCCGGAACGCCAGTTAGCTTACAAATCGGTCAGGATGGCATCGTCCATTCAATCAATGCTAGTAAGAAAACGACGTTGTT
CAACGGGATCCCGTTATCTGTCACGGCGACTGACTTAGAGCGCGAGCTATGGATCGAAGGCTATGAGAATGGCGACGAGA
GCGAAGTTAAACGTTATTCAGTCGACCACGATGCGACCATTATCGAAAGTGATGGGACTGAGGTGCAGATTGCCCCGGTA
GATGTTCAATTTCAGTCAGCCAAGCTCTGGCAGCGGATGCTGACCAATTTTGCTGGTCCCATGAATAACTTCATCTTAGC
CATCATCACGTTTGCAATCCTGGCGTTCATGCAGGGTGGCGTGACGAGTACGACGACTAATGTTGCGGCGACGACGGCCA
ATTCGGTTGCGCGTCAAGCTGGGATTCAAAAAGGTGATCAAATTGTCGCTGTCAATGGTAAAAAGATGACCAGTGCGCAG
TCGATTTCGCTCCTGATTCAAGACAGTCCCAAGCAACGGTTGCGTTTGACGATCAAACGTGATGGTCAAACCAAAAAAAT
TACGGTAACACCAGCTGCTAAGACGGTCTCTGGTAATCGCATCGGCCAAATCGGCGTGATGTGGGCGACGAAGACTGACA
AGAGTTTTGGTGCCAAATTGGCCTATGGGTTTACGGGCTCGTGGAATATCACCAAACAGATTTTTCAGGTCCTCGGCCGG
ATGGTCACGCATGGCTTCAGTTTGAACGATTTAGGTGGCCCGGTCGCTATCTTTGCCACGACCTCGCAAGCAGCTAAATC
AGGTCTGCGAACGGTGATTTATTTGCTGGCAGTCTTGTCGATCAACCTGGGAATTGTCAATTTATTACCAATTCCAGCCC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGAGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCTTGATGTTATTAATGATTTTAGTCACTTGGAATGATATCCAACGATATTTCTTCTAA

Domains


Predicted by InterproScan.

(7-411)

(212-260)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A241RT34

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.299

100

0.496

  eeP Streptococcus thermophilus LMD-9

49.065

100

0.494


Multiple sequence alignment