Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | B7L41_RS17590 | Genome accession | NZ_CP020595 |
| Coordinates | 3555203..3555718 (+) | Length | 171 a.a. |
| NCBI ID | WP_000477151.1 | Uniprot ID | V5VA61 |
| Organism | Acinetobacter baumannii strain USA15 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3550203..3560718
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7L41_RS17575 (B7L41_17575) | - | 3550534..3551994 (+) | 1461 | WP_000004974.1 | amino acid permease | - |
| B7L41_RS17580 (B7L41_17580) | - | 3552272..3553477 (+) | 1206 | WP_000512708.1 | RtcB family protein | - |
| B7L41_RS19870 | - | 3553481..3553639 (+) | 159 | WP_000692859.1 | hypothetical protein | - |
| B7L41_RS17585 (B7L41_17585) | omp38 | 3553762..3554823 (-) | 1062 | WP_000777885.1 | outer membrane protein Omp38 | - |
| B7L41_RS17590 (B7L41_17590) | fimT | 3555203..3555718 (+) | 516 | WP_000477151.1 | GspH/FimT family pseudopilin | Machinery gene |
| B7L41_RS17595 (B7L41_17595) | - | 3555827..3557002 (+) | 1176 | WP_000129968.1 | thiolase family protein | - |
| B7L41_RS17600 (B7L41_17600) | - | 3557129..3557572 (+) | 444 | WP_001176585.1 | VOC family protein | - |
| B7L41_RS17605 (B7L41_17605) | - | 3557615..3557968 (-) | 354 | WP_000457783.1 | DMT family transporter | - |
| B7L41_RS17610 (B7L41_17610) | - | 3558051..3558536 (-) | 486 | WP_000935247.1 | DUF934 domain-containing protein | - |
| B7L41_RS17615 (B7L41_17615) | - | 3558529..3560172 (-) | 1644 | WP_000281764.1 | nitrite/sulfite reductase | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19606.86 Da Isoelectric Point: 8.8196
>NTDB_id=188445 B7L41_RS17590 WP_000477151.1 3555203..3555718(+) (fimT) [Acinetobacter baumannii strain USA15]
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIRHKNVVLCPSSDQLVCNTNWD
NRVISFVDNNRNLQHDLNEELLTSIDLNHHYGSMKLQRFGKKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKM
GHVRLEELKNC
Nucleotide
Download Length: 516 bp
>NTDB_id=188445 B7L41_RS17590 WP_000477151.1 3555203..3555718(+) (fimT) [Acinetobacter baumannii strain USA15]
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAT
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
ATGTTTAAATCTCCTGGTTTTACTATAGTTGAGCTCACTATAACACTCGTAATTCTTGTGATTATGTCAGTTATAGCCAT
TCCTTTATACCATCAATTTATGGCATCTGTAGAACTAAAAAATACGCCGCGCATACTCACAATTCATATACAAAAAGCCA
AATATGACGCAATTATTAGGCATAAGAATGTTGTTCTTTGTCCAAGTTCTGATCAATTGGTCTGCAATACGAATTGGGAT
AACCGCGTAATCAGCTTTGTAGATAATAACCGTAATCTACAACATGATTTAAATGAAGAATTATTGACCTCTATAGATCT
TAACCATCACTACGGTTCTATGAAATTACAACGTTTTGGAAAAAAACAAAATAGTATTATTTTTCAAGGTAGTTCTGGAT
TACCCATCGAGTCGAATGGCAGTTTTATCTATTGTTCTTATGACCAGCTTAAAAACTTTAAATTAATTCTTAGCAAAATG
GGCCATGTGCGCTTAGAAGAGCTTAAAAATTGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Acinetobacter baylyi ADP1 |
43.976 |
97.076 |
0.427 |