Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | BAY21_RS05635 | Genome accession | NZ_CP016439 |
| Coordinates | 1049606..1050562 (+) | Length | 318 a.a. |
| NCBI ID | WP_011226622.1 | Uniprot ID | A0A8D6XRE9 |
| Organism | Streptococcus thermophilus strain CS8 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1044606..1055562
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAY21_RS05595 (BAY21_05595) | - | 1045503..1045865 (+) | 363 | WP_011226630.1 | DUF1033 family protein | - |
| BAY21_RS05600 (BAY21_05600) | comGA/cglA/cilD | 1045946..1046887 (+) | 942 | WP_011226629.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BAY21_RS05605 (BAY21_05605) | comYB | 1046769..1047869 (+) | 1101 | WP_148148889.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BAY21_RS05610 (BAY21_05610) | comYC | 1047866..1048192 (+) | 327 | WP_002946126.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BAY21_RS05615 (BAY21_05615) | comYD | 1048152..1048580 (+) | 429 | WP_011226626.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| BAY21_RS05620 (BAY21_05620) | comGE | 1048552..1048845 (+) | 294 | WP_011226625.1 | competence type IV pilus minor pilin ComGE | - |
| BAY21_RS05625 (BAY21_05625) | comYF | 1048829..1049266 (+) | 438 | WP_014608742.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| BAY21_RS05630 (BAY21_05630) | comGG | 1049244..1049561 (+) | 318 | WP_002952035.1 | competence type IV pilus minor pilin ComGG | - |
| BAY21_RS05635 (BAY21_05635) | comYH | 1049606..1050562 (+) | 957 | WP_011226622.1 | class I SAM-dependent methyltransferase | Machinery gene |
| BAY21_RS05640 (BAY21_05640) | - | 1050618..1051811 (+) | 1194 | WP_022096898.1 | acetate kinase | - |
| BAY21_RS05645 (BAY21_05645) | - | 1052060..1052257 (+) | 198 | WP_011681682.1 | helix-turn-helix transcriptional regulator | - |
| BAY21_RS11075 (BAY21_05650) | - | 1052500..1052925 (+) | 426 | WP_041827107.1 | CPBP family intramembrane glutamic endopeptidase | - |
| BAY21_RS05655 (BAY21_05655) | - | 1052999..1053447 (+) | 449 | Protein_1055 | CAAX protease | - |
| BAY21_RS05660 (BAY21_05660) | - | 1053550..1054212 (+) | 663 | WP_011227583.1 | CPBP family intramembrane glutamic endopeptidase | - |
| BAY21_RS05665 (BAY21_05665) | proC | 1054242..1055012 (-) | 771 | WP_011226616.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 35857.00 Da Isoelectric Point: 4.7123
>NTDB_id=188258 BAY21_RS05635 WP_011226622.1 1049606..1050562(+) (comYH) [Streptococcus thermophilus strain CS8]
MNFEAIETAFELLLENVQTIENDLGTHAYDALIEQNSYYLGAEVANELIIKNNEKLRALNLSKEEWRRAFQFLFIKLGQL
EALQANHQFTPDAIGFIILYLLEGLTQEKQLDILEIGSGTGNLAETLLNNSQKTLNYMGMEVDDLLIDLSASIAEVVNSV
AVYIQGDAVRPHILKESNVIISDLPIGYYPNDEIASRFKVAATGEHTYAHHLLMEQSLKYLKKDGIAIFLAPTNLLTSPQ
SDLLKKWLSGYADIIAVITLPEAAFGNKHNMKSIFVLKKQTKNAPETFVYPLSDLQNPRILKDFTENFQKWKSDNSIF
MNFEAIETAFELLLENVQTIENDLGTHAYDALIEQNSYYLGAEVANELIIKNNEKLRALNLSKEEWRRAFQFLFIKLGQL
EALQANHQFTPDAIGFIILYLLEGLTQEKQLDILEIGSGTGNLAETLLNNSQKTLNYMGMEVDDLLIDLSASIAEVVNSV
AVYIQGDAVRPHILKESNVIISDLPIGYYPNDEIASRFKVAATGEHTYAHHLLMEQSLKYLKKDGIAIFLAPTNLLTSPQ
SDLLKKWLSGYADIIAVITLPEAAFGNKHNMKSIFVLKKQTKNAPETFVYPLSDLQNPRILKDFTENFQKWKSDNSIF
Nucleotide
Download Length: 957 bp
>NTDB_id=188258 BAY21_RS05635 WP_011226622.1 1049606..1050562(+) (comYH) [Streptococcus thermophilus strain CS8]
ATGAATTTTGAAGCAATTGAGACAGCTTTTGAGCTGTTGTTAGAAAATGTCCAAACTATTGAAAATGATCTTGGAACCCA
TGCTTACGATGCACTTATTGAGCAAAATTCCTATTATTTGGGGGCTGAGGTTGCTAATGAGCTCATCATCAAAAACAACG
AGAAATTACGGGCGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTGCTTTTCAGTTTTTGTTTATCAAACTAGGGCAATTG
GAAGCTTTACAAGCCAATCACCAATTTACACCAGATGCTATCGGATTTATCATTCTGTACTTGCTCGAAGGTTTGACCCA
GGAAAAACAATTAGATATCTTGGAGATTGGTTCGGGAACAGGAAACTTGGCTGAAACTCTTCTAAATAATAGTCAGAAAA
CCCTTAATTATATGGGGATGGAAGTTGATGATCTTCTTATCGATTTGTCAGCTAGTATTGCTGAGGTGGTGAATTCAGTA
GCGGTTTATATCCAAGGGGATGCTGTTCGACCACATATTCTCAAAGAGAGCAACGTTATTATCAGCGATTTACCTATAGG
TTACTACCCTAATGATGAGATTGCGAGTCGTTTCAAGGTGGCAGCAACTGGCGAACACACTTATGCCCATCATCTTCTTA
TGGAGCAATCGCTTAAGTATTTGAAGAAAGATGGTATTGCTATTTTTTTGGCACCAACCAATCTTTTGACAAGCCCTCAA
AGTGATCTGCTTAAGAAGTGGTTATCAGGATATGCTGATATTATTGCTGTTATTACTCTTCCAGAAGCAGCTTTTGGCAA
TAAACATAACATGAAGTCTATCTTTGTGCTAAAAAAACAAACTAAAAATGCTCCTGAGACCTTCGTTTACCCACTTAGCG
ATTTGCAAAATCCAAGGATCCTCAAGGATTTTACAGAGAATTTCCAAAAATGGAAATCAGATAATTCCATTTTCTAG
ATGAATTTTGAAGCAATTGAGACAGCTTTTGAGCTGTTGTTAGAAAATGTCCAAACTATTGAAAATGATCTTGGAACCCA
TGCTTACGATGCACTTATTGAGCAAAATTCCTATTATTTGGGGGCTGAGGTTGCTAATGAGCTCATCATCAAAAACAACG
AGAAATTACGGGCGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTGCTTTTCAGTTTTTGTTTATCAAACTAGGGCAATTG
GAAGCTTTACAAGCCAATCACCAATTTACACCAGATGCTATCGGATTTATCATTCTGTACTTGCTCGAAGGTTTGACCCA
GGAAAAACAATTAGATATCTTGGAGATTGGTTCGGGAACAGGAAACTTGGCTGAAACTCTTCTAAATAATAGTCAGAAAA
CCCTTAATTATATGGGGATGGAAGTTGATGATCTTCTTATCGATTTGTCAGCTAGTATTGCTGAGGTGGTGAATTCAGTA
GCGGTTTATATCCAAGGGGATGCTGTTCGACCACATATTCTCAAAGAGAGCAACGTTATTATCAGCGATTTACCTATAGG
TTACTACCCTAATGATGAGATTGCGAGTCGTTTCAAGGTGGCAGCAACTGGCGAACACACTTATGCCCATCATCTTCTTA
TGGAGCAATCGCTTAAGTATTTGAAGAAAGATGGTATTGCTATTTTTTTGGCACCAACCAATCTTTTGACAAGCCCTCAA
AGTGATCTGCTTAAGAAGTGGTTATCAGGATATGCTGATATTATTGCTGTTATTACTCTTCCAGAAGCAGCTTTTGGCAA
TAAACATAACATGAAGTCTATCTTTGTGCTAAAAAAACAAACTAAAAATGCTCCTGAGACCTTCGTTTACCCACTTAGCG
ATTTGCAAAATCCAAGGATCCTCAAGGATTTTACAGAGAATTTCCAAAAATGGAAATCAGATAATTCCATTTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
68.889 |
99.057 |
0.682 |
| comYH | Streptococcus mutans UA140 |
68.889 |
99.057 |
0.682 |