Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   B7L44_RS19475 Genome accession   NZ_CP020588
Coordinates   3995128..3995763 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter nosocomialis strain SSA3     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3990128..4000763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7L44_RS19455 (B7L44_19455) - 3990205..3991020 (+) 816 WP_004710941.1 DsbC family protein -
  B7L44_RS19460 (B7L44_19460) - 3991265..3992566 (+) 1302 WP_002048970.1 homoserine dehydrogenase -
  B7L44_RS19465 (B7L44_19465) thrC 3992622..3993761 (+) 1140 WP_002048893.1 threonine synthase -
  B7L44_RS19470 (B7L44_19470) pbpG 3993870..3994916 (-) 1047 WP_004710943.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  B7L44_RS19475 (B7L44_19475) letA 3995128..3995763 (+) 636 WP_000633799.1 response regulator transcription factor GacA Regulator
  B7L44_RS19480 (B7L44_19480) pilS 3995774..3997342 (+) 1569 WP_004710946.1 sensor histidine kinase Regulator
  B7L44_RS19485 (B7L44_19485) - 3997367..3998788 (+) 1422 WP_083009365.1 sigma-54-dependent transcriptional regulator -
  B7L44_RS19490 (B7L44_19490) - 3998792..3999976 (-) 1185 WP_006581175.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=188156 B7L44_RS19475 WP_000633799.1 3995128..3995763(+) (letA) [Acinetobacter nosocomialis strain SSA3]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=188156 B7L44_RS19475 WP_000633799.1 3995128..3995763(+) (letA) [Acinetobacter nosocomialis strain SSA3]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCAGATGT
TGAGGTAATTGGACAAGCCGAATCTGGGGAAGAAGCTATTGCTATCGTTCGCCAGCAACATCCGCAAGTCGTACTACTTG
ATGTCAACATGCCAGGCATCGGTGGTGTAGAAACAACTCGTCGTTTATTACAAACAGCTCCAGAGACGAAAGTCATTGCT
GTAAGTGGCCTTGCCGAAGAACCCTACCCATCTTTATTGCTAAAAGCTGGAGCAAAAGGCTATATCACCAAAGGAGCCCC
AATTGCCGAGATGGTTCGTGCAATTAATAAGGTCATGCAGGGTGGTAAATATTTTAGTGCCGATATTGCCGAGCAACTGG
CAAGCTCTTATTTATCTGATACTCAACAATCTCCTTTTGATTCGTTATCGGAGCGGGAAATGCAAGTTGCGATGATGGTC
GTTAACTGTATTAGCGCACAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTACCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTCACACATCTTGCGATTCGTTACGGTCTGATCAAACCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55