Detailed information NTG0188151

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: VSVS05_RS06795
• Genome accession: NZ_CP016414
• Coordinates: 1497962..1499431 (+)
• Length: 489 a.a.
• NCBI ID: WP_065545323.1
• Uniprot ID: -
• Organism: Vibrio scophthalmi strain VS-05
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 1492962..1504431

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VSVS05_RS06785 (VSVS05_01392)	-	1494910..1495602 (+)	693	WP_005599138.1	hypothetical protein	-
VSVS05_RS06790 (VSVS05_01393)	-	1495623..1497926 (+)	2304	WP_065545322.1	response regulator	-
VSVS05_RS06795 (VSVS05_01394)	luxO	1497962..1499431 (+)	1470	WP_065545323.1	sigma-54-dependent transcriptional regulator	Regulator
VSVS05_RS06800 (VSVS05_01395)	-	1499409..1500476 (+)	1068	WP_065545324.1	glycosyltransferase family 4 protein	-
VSVS05_RS06805 (VSVS05_01396)	-	1500599..1501813 (+)	1215	WP_005599145.1	glycosyltransferase	-
VSVS05_RS06810 (VSVS05_01397)	-	1501823..1503013 (+)	1191	WP_065545325.1	glycosyltransferase family 4 protein	-
VSVS05_RS22415 (VSVS05_01398)	-	1503006..1503935 (+)	930	WP_231893162.1	lipopolysaccharide biosynthesis protein	-

Sequence

Protein

• Length: 489 a.a.
• Molecular weight: 54876.68 Da
• Isoelectric Point: 5.9703

>NTDB_id=188151 VSVS05_RS06795 WP_065545323.1 1497962..1499431(+) (luxO) [Vibrio scophthalmi strain VS-05]
MKSKVLLIEDSTSLAVLYQQYVKDEPFDLFHVETGREAIAFIERNVPQLVILDLKLPDMDGQDILDWIVENQVPTSVIVA
TAHGSVDVAVNLLQKGAKDFIEKPIKADRLKTSINLHLQRAKLEDLVENIESKFDRQRFHGFIGSSLPMQGVYKIIDSVA
PTTASVFIIGESGTGKEVCAEAIHKESKRRDKPFIAINCGAIPKDLMESEIFGHLKGAFTGATTDRKGAATAANGGTMFL
DELCEMDLEMQKKLLRFLQTGTFTPLGANKEQKVDVRIICATNRDPLVEVEEGRFREDLYYRVHVVPIEMPPLRERGGDI
ATLATHFLKLYAKQDQKKFRTINKDAEAILKRYAWPGNVRQLQNILRNIVVLNNDERLAVEHLPTQVVQLRKAASVTRTA
SIDNHPSPAAQEHIVNETNHTATSQSESSNVSESTIRPMWQIEREAIQQAIELCDGNVLNAAVLLELSPSTVYRKKQAWE
TEDEQNFVQ

Nucleotide

• Length: 1470 bp

>NTDB_id=188151 VSVS05_RS06795 WP_065545323.1 1497962..1499431(+) (luxO) [Vibrio scophthalmi strain VS-05]
ATGAAATCAAAAGTACTTTTAATCGAAGATTCGACCTCACTGGCAGTGTTGTATCAGCAGTATGTCAAAGACGAGCCTTT
TGACCTTTTTCACGTTGAAACAGGCCGTGAAGCGATCGCATTTATTGAGCGCAACGTCCCTCAGTTGGTGATCCTTGATC
TCAAGTTACCTGATATGGATGGCCAAGACATTCTCGACTGGATTGTTGAAAATCAAGTGCCAACGTCTGTGATTGTCGCG
ACCGCGCACGGTTCGGTTGATGTTGCCGTCAACTTGCTACAGAAAGGCGCTAAAGATTTTATAGAAAAACCAATCAAAGC
CGACCGTTTGAAAACATCGATTAATCTGCACCTTCAACGTGCCAAACTCGAAGATTTGGTTGAAAACATTGAGAGCAAAT
TTGATCGCCAACGCTTCCATGGTTTTATTGGTAGTAGCCTACCGATGCAAGGTGTTTATAAAATAATCGACTCTGTAGCC
CCAACCACCGCCAGCGTGTTTATTATCGGCGAAAGTGGTACCGGTAAAGAAGTGTGCGCTGAAGCGATTCATAAAGAGAG
TAAGCGCCGTGATAAGCCGTTTATCGCAATCAACTGTGGCGCAATTCCTAAAGACTTGATGGAAAGTGAGATTTTTGGTC
ATCTAAAAGGGGCATTTACCGGTGCAACAACCGATAGAAAAGGTGCAGCGACAGCAGCCAATGGCGGCACGATGTTCCTT
GATGAACTATGCGAAATGGACTTGGAAATGCAGAAAAAATTGCTGCGTTTTCTCCAAACAGGCACGTTCACTCCTCTGGG
TGCCAACAAGGAACAAAAGGTTGATGTTCGCATTATTTGTGCGACCAACCGCGATCCTCTAGTGGAGGTTGAAGAAGGCC
GATTTAGAGAAGATTTATATTACCGCGTACATGTTGTGCCGATTGAAATGCCCCCACTACGCGAGCGCGGTGGTGACATT
GCCACGCTTGCCACCCATTTTCTAAAACTGTACGCGAAGCAAGACCAGAAAAAATTCCGCACTATCAATAAAGACGCAGA
AGCGATCTTAAAACGTTACGCATGGCCAGGTAACGTGCGTCAATTACAGAACATACTGCGTAATATTGTCGTGCTCAATA
ACGATGAGCGTTTAGCGGTGGAGCACTTACCGACACAAGTGGTGCAATTACGAAAAGCTGCCAGCGTAACGCGAACGGCC
AGTATCGATAATCACCCTTCCCCTGCCGCTCAAGAGCATATTGTGAATGAAACGAATCACACCGCCACGTCACAAAGCGA
GAGTTCCAATGTCAGTGAGTCGACCATTCGCCCTATGTGGCAGATTGAACGTGAAGCCATTCAGCAAGCGATTGAACTGT
GTGATGGCAACGTGCTCAATGCAGCAGTACTACTCGAACTGAGCCCTTCTACGGTTTACCGTAAAAAACAGGCTTGGGAA
ACAGAAGATGAACAAAACTTCGTCCAATGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (439-475)

• Sigma-54 interaction domain (Sigma54_activat) (143-309)

• Response regulator receiver domain (Response_reg) (5-114)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	51.477	96.933	0.499
pilR	Acinetobacter baumannii strain A118	37.295	99.796	0.372