Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   B7L38_RS10050 Genome accession   NZ_CP020578
Coordinates   1976015..1976650 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain SSA12     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1971015..1981650
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7L38_RS10030 (B7L38_10030) - 1971092..1971907 (+) 816 WP_000011163.1 DsbC family protein -
  B7L38_RS10035 (B7L38_10035) - 1972152..1973453 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  B7L38_RS10040 (B7L38_10040) thrC 1973509..1974648 (+) 1140 WP_000063593.1 threonine synthase -
  B7L38_RS10045 (B7L38_10045) pbpG 1974756..1975802 (-) 1047 WP_031946417.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  B7L38_RS10050 (B7L38_10050) letA 1976015..1976650 (+) 636 WP_000633799.1 response regulator Regulator
  B7L38_RS10055 (B7L38_10055) pilS 1976661..1978229 (+) 1569 WP_033915466.1 PAS domain-containing sensor histidine kinase Regulator
  B7L38_RS10060 (B7L38_10060) - 1978254..1979675 (+) 1422 WP_017816292.1 sigma-54-dependent transcriptional regulator -
  B7L38_RS10065 (B7L38_10065) - 1979679..1980863 (-) 1185 WP_000939107.1 S41 family peptidase -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=187747 B7L38_RS10050 WP_000633799.1 1976015..1976650(+) (letA) [Acinetobacter baumannii strain SSA12]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=187747 B7L38_RS10050 WP_000633799.1 1976015..1976650(+) (letA) [Acinetobacter baumannii strain SSA12]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAATATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCATTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55


Multiple sequence alignment