Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   FORC37_RS07055 Genome accession   NZ_CP016321
Coordinates   1507811..1509304 (-) Length   497 a.a.
NCBI ID   WP_045608883.1    Uniprot ID   -
Organism   Vibrio vulnificus strain FORC_037     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 1502811..1514304
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC37_RS07040 (FORC37_1348) - 1504209..1505387 (-) 1179 WP_038969734.1 glycosyltransferase family 4 protein -
  FORC37_RS07045 (FORC37_1349) - 1505384..1506577 (-) 1194 WP_088427706.1 glycosyltransferase -
  FORC37_RS07050 (FORC37_1350) - 1506685..1507818 (-) 1134 WP_080532827.1 glycosyltransferase -
  FORC37_RS07055 (FORC37_1351) luxO 1507811..1509304 (-) 1494 WP_045608883.1 sigma-54-dependent transcriptional regulator Regulator
  FORC37_RS07060 (FORC37_1352) - 1509461..1511749 (-) 2289 WP_088427707.1 ATP-binding protein -
  FORC37_RS07065 (FORC37_1353) - 1511773..1512573 (-) 801 WP_039547260.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
  FORC37_RS07070 (FORC37_1354) - 1512588..1513280 (-) 693 WP_198300268.1 AAA family ATPase -

Sequence

Protein


Download         Length: 497 a.a.        Molecular weight: 55788.94 Da        Isoelectric Point: 6.6070

>NTDB_id=186876 FORC37_RS07055 WP_045608883.1 1507811..1509304(-) (luxO) [Vibrio vulnificus strain FORC_037]
MRAKVLLVEDSTSLAILYKQYVKDEPYDIFHVETGRDAIQFIERNTPQLVILDLKLPDMSGEDVLDWINQNDVPTAVIIA
TAHGSVDIAVSLMNKGAEDFLEKPIKADRLKTSIAVHLKRAKLEHLVENMQSRFDRPRYHGFIGACLPMQAVYKIIDSVA
PTTASVFINGESGTGKEVCAEAIHKQSLRKDQPFIAINCGAIPRDLMESEIFGHLKGAFTGATTDRKGAAMLANGGTLFL
DELCEMELEMQKKLLRFLQTGTFTPLGGSKEIKVDVRIICATNRDPLKEVEEGRFREDLYYRVHVVPIEMPPLRERGNDI
VELANHFLKTYAKEDGKKFNSISKEAQSILKKYNWPGNVRQLQNIIRNIVVLNDDNQLNMEHLPAQLTTKPQTVKEPAKL
STPPQPVQAVIQEMRNGHEALNHHSLETQTSKANPLAHNAFHHSDGSIRPMWQIEREAIQNAIAFCDGNVISAAVMLELS
PSTVYRKKQAWEAEENA

Nucleotide


Download         Length: 1494 bp        

>NTDB_id=186876 FORC37_RS07055 WP_045608883.1 1507811..1509304(-) (luxO) [Vibrio vulnificus strain FORC_037]
ATGCGAGCAAAAGTACTGTTAGTCGAGGATTCCACTTCACTTGCCATTTTATATAAGCAATACGTCAAAGATGAACCCTA
TGACATTTTTCACGTGGAAACCGGACGTGACGCGATTCAGTTTATTGAGCGCAATACACCGCAACTGGTGATTTTAGATC
TCAAGTTGCCCGATATGTCCGGGGAAGATGTGCTTGACTGGATCAACCAAAACGATGTTCCGACCGCGGTTATCATTGCC
ACCGCTCATGGTTCCGTCGACATCGCCGTCAGCTTAATGAACAAAGGGGCGGAAGATTTTCTCGAAAAGCCAATCAAAGC
CGACCGTTTAAAAACATCCATTGCCGTTCATCTAAAACGCGCCAAATTAGAGCATTTAGTTGAGAACATGCAATCTCGCT
TCGACAGACCACGTTATCACGGCTTTATCGGCGCGTGCCTGCCAATGCAGGCCGTTTATAAAATCATTGATTCCGTGGCG
CCAACCACCGCCAGTGTTTTTATTAACGGAGAAAGTGGCACAGGGAAAGAAGTGTGTGCTGAAGCGATACACAAACAGAG
TCTGCGCAAAGACCAGCCCTTTATCGCAATCAACTGTGGGGCGATTCCTCGTGACTTAATGGAAAGCGAAATCTTTGGTC
ACTTAAAAGGGGCGTTTACCGGAGCGACAACCGATCGCAAAGGTGCAGCAATGCTGGCCAACGGCGGCACGCTATTTCTC
GATGAATTGTGCGAGATGGAACTGGAGATGCAGAAAAAACTGCTGCGTTTTCTTCAGACCGGCACCTTCACCCCACTCGG
CGGCAGTAAAGAAATCAAAGTGGATGTACGCATCATCTGCGCCACCAATCGCGATCCCCTCAAAGAGGTCGAAGAAGGCC
GTTTTAGGGAAGATCTCTACTATCGTGTCCATGTGGTTCCAATTGAAATGCCACCACTGAGAGAACGAGGTAACGACATC
GTTGAGCTGGCCAATCACTTCCTCAAAACTTACGCCAAAGAGGACGGCAAAAAATTCAACTCAATCAGCAAAGAAGCGCA
ATCAATACTTAAAAAATACAACTGGCCGGGCAATGTCCGTCAGTTGCAAAACATCATTCGCAACATTGTCGTTCTCAACG
ATGACAACCAACTGAATATGGAACATTTGCCGGCTCAACTGACCACCAAACCGCAAACCGTCAAAGAACCCGCTAAACTC
TCAACACCACCTCAACCCGTTCAAGCGGTCATCCAAGAGATGCGCAACGGACATGAGGCGTTAAACCATCATTCGCTTGA
GACGCAAACATCCAAGGCCAATCCACTCGCTCACAATGCGTTCCACCATTCTGACGGCAGTATCCGTCCAATGTGGCAAA
TTGAACGCGAAGCGATTCAAAACGCCATCGCCTTTTGCGACGGCAACGTGATCAGTGCGGCGGTGATGTTGGAGCTAAGC
CCTTCGACGGTGTATCGCAAAAAACAAGCGTGGGAGGCAGAAGAAAATGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(5-114)

Bacterial regulatory protein, Fis family (HTH_8)

(451-487)

Sigma-54 interaction domain (Sigma54_activat)

(144-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

51.235

97.787

0.501
  pilR Acinetobacter baumannii strain A118

37.014

98.39

0.364

Multiple sequence alignment