Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   FORC37_RS05130 Genome accession   NZ_CP016321
Coordinates   1064534..1065934 (+) Length   466 a.a.
NCBI ID   WP_198300263.1    Uniprot ID   -
Organism   Vibrio vulnificus strain FORC_037     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 1059534..1070934
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC37_RS05105 (FORC37_0965) rsxB 1060139..1060735 (-) 597 WP_011080896.1 electron transport complex subunit RsxB -
  FORC37_RS05110 (FORC37_0966) rsxA 1060737..1061315 (-) 579 WP_017428869.1 electron transport complex subunit RsxA -
  FORC37_RS05120 (FORC37_0967) - 1061913..1062101 (+) 189 WP_017428870.1 hypothetical protein -
  FORC37_RS05125 (FORC37_0968) uvrB 1062196..1064226 (+) 2031 WP_013572115.1 excinuclease ABC subunit UvrB -
  FORC37_RS05130 (FORC37_0969) luxO 1064534..1065934 (+) 1401 WP_198300263.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  FORC37_RS05135 (FORC37_0970) luxU 1065934..1066281 (+) 348 WP_088427589.1 quorum-sensing phosphorelay protein LuxU -
  FORC37_RS05140 (FORC37_0971) - 1066368..1067258 (-) 891 WP_038969071.1 YvcK family protein -
  FORC37_RS05145 (FORC37_0972) moaA 1067573..1068562 (+) 990 WP_017790688.1 GTP 3',8-cyclase MoaA -
  FORC37_RS05150 (FORC37_0973) moaB 1068641..1069153 (+) 513 WP_017428876.1 molybdenum cofactor biosynthesis protein B -
  FORC37_RS05155 (FORC37_0974) moaC 1069164..1069643 (+) 480 WP_017428877.1 cyclic pyranopterin monophosphate synthase MoaC -
  FORC37_RS05160 (FORC37_0975) moaD 1069640..1069885 (+) 246 WP_011080886.1 molybdopterin synthase sulfur carrier subunit -
  FORC37_RS05165 (FORC37_0976) moaE 1069887..1070342 (+) 456 WP_011080885.1 molybdopterin synthase catalytic subunit MoaE -

Sequence

Protein


Download         Length: 466 a.a.        Molecular weight: 52071.56 Da        Isoelectric Point: 6.2540

>NTDB_id=186871 FORC37_RS05130 WP_198300263.1 1064534..1065934(+) (luxO) [Vibrio vulnificus strain FORC_037]
MQQITTTKQRYLLMVEDTASVAALYRSYLMPLGIDINIVGTGRDAIDSLKHRIPDLILLDLRLPDMTGMDVLHAVKASHP
DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKASKLKNDSDSAGSQSYQGFIGSSQKMQQVYRTI
DSAASSKASIFITGESGTGKEVCAEAIHAASRRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADGG
TLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRER
GEDVIEIAYSLLGYMSHEEGKNFVRFSQSVIDRFNEYEWPGNVRQLQNVLRNVVVLNNGKEITMEMLPPPLNQPFERKES
AQPDLSELISVRDICPLWLTEKLAIEQAIKACDGNIPRAAGYLDVSPSTIYRKLQAWNEKEEKQKA

Nucleotide


Download         Length: 1401 bp        

>NTDB_id=186871 FORC37_RS05130 WP_198300263.1 1064534..1065934(+) (luxO) [Vibrio vulnificus strain FORC_037]
ATGCAACAAATAACGACAACGAAACAGCGTTACTTGCTGATGGTAGAAGACACCGCTTCTGTCGCAGCCCTCTATCGCTC
CTATCTCATGCCATTGGGTATCGATATCAATATCGTGGGTACTGGGCGTGACGCGATAGACAGTTTAAAACATCGCATTC
CAGATCTTATTCTGCTGGACTTACGCCTACCGGACATGACGGGAATGGACGTATTGCATGCAGTGAAAGCAAGCCACCCT
GATGTTCCTATCATTTTCATGACCGCACACGGCTCGATCGATACTGCTGTTGAAGCAATGCGACACGGCTCACAAGATTT
CTTGATCAAACCCTGTGAAGCTGACCGACTCAGGGTCACGGTGAACAACGCTATCCGCAAGGCGAGCAAGCTAAAAAATG
ATTCAGACAGCGCCGGAAGTCAGAGTTATCAAGGCTTTATCGGCAGTAGTCAAAAAATGCAGCAGGTCTACCGAACCATT
GACTCGGCGGCCAGTAGTAAAGCGAGTATTTTTATCACTGGTGAAAGTGGTACGGGTAAAGAGGTGTGCGCAGAAGCCAT
TCATGCAGCCAGTCGACGCGGAGACAAGCCATTTATCGCGATTAACTGTGCAGCGATCCCCAAGGATTTGATTGAAAGCG
AGCTATTTGGGCATGTCAAAGGTGCGTTTACTGGCGCAGCGACCGATCGCCAAGGGGCGGCAGAGCTCGCCGATGGAGGC
ACACTGTTTCTTGATGAGCTGTGTGAAATGGACCTAGATCTGCAAACAAAATTGCTGCGTTTTATCCAAACGGGTACTTT
CCAAAAAGTGGGCTCTTCAAAAATGAAGAGTGTTGACGTGCGCTTTGTGTGCGCGACAAACCGAGACCCTTGGAAAGAAG
TACAAGAAGGGCGCTTTCGTGAAGATTTGTACTACCGACTTTATGTGATTCCACTGCACTTGCCACCACTTCGTGAGCGT
GGAGAGGATGTCATTGAGATCGCTTACTCGTTACTGGGTTATATGTCACATGAGGAAGGGAAAAACTTTGTTCGTTTCTC
TCAATCTGTGATAGATAGATTTAATGAATATGAGTGGCCAGGCAATGTGCGTCAGTTACAAAATGTGCTGCGTAACGTGG
TGGTACTTAACAACGGTAAAGAGATTACCATGGAGATGTTGCCGCCTCCTTTGAATCAGCCCTTTGAACGCAAAGAAAGT
GCGCAACCTGATCTGAGTGAGTTGATTTCCGTCAGGGATATTTGTCCATTGTGGTTGACCGAGAAACTGGCGATTGAACA
AGCGATTAAAGCGTGTGATGGTAACATTCCGAGAGCCGCAGGCTATCTTGATGTCAGCCCGTCGACGATTTATCGCAAGT
TACAGGCGTGGAATGAAAAAGAAGAAAAACAGAAAGCATAA

Domains

Predicted by InterproScan.

Bacterial regulatory protein, Fis family (HTH_8)

(417-457)

Response regulator receiver domain (Response_reg)

(13-121)

Sigma-54 interaction domain (Sigma54_activat)

(147-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

86.099

95.708

0.824

Multiple sequence alignment