Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   A6J87_RS09120 Genome accession   NZ_CP020451
Coordinates   1895759..1896439 (+) Length   226 a.a.
NCBI ID   WP_004182305.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_259     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1890759..1901439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J87_RS09100 (A6J87_09050) - 1890812..1891645 (-) 834 WP_037601006.1 helix-turn-helix domain-containing protein -
  A6J87_RS09105 (A6J87_09055) - 1891737..1893338 (+) 1602 WP_080611932.1 ABC transporter ATP-binding protein -
  A6J87_RS09110 (A6J87_09060) - 1893460..1894728 (-) 1269 WP_080611933.1 nucleobase:cation symporter-2 family protein -
  A6J87_RS09115 (A6J87_09065) - 1894728..1895309 (-) 582 WP_004182304.1 xanthine phosphoribosyltransferase -
  A6J87_RS09120 (A6J87_09070) braR 1895759..1896439 (+) 681 WP_004182305.1 response regulator transcription factor Regulator
  A6J87_RS09125 (A6J87_09075) - 1896429..1897403 (+) 975 WP_080611934.1 sensor histidine kinase -
  A6J87_RS09130 (A6J87_09080) - 1897546..1898304 (+) 759 WP_080611935.1 ABC transporter ATP-binding protein -
  A6J87_RS09135 (A6J87_09085) - 1898306..1900306 (+) 2001 WP_037602162.1 ABC transporter permease -
  A6J87_RS09140 (A6J87_09090) - 1900391..1900885 (+) 495 WP_004182309.1 YkgJ family cysteine cluster protein -

Sequence

Protein


Download         Length: 226 a.a.        Molecular weight: 26073.42 Da        Isoelectric Point: 4.9992

>NTDB_id=186798 A6J87_RS09120 WP_004182305.1 1895759..1896439(+) (braR) [Streptococcus salivarius strain FDAARGOS_259]
MHKILLVEDDEVIRQQVKKMLEQWGYEVVLVEDFMEVLSIFVKVEPHLVLMDIGLPLFNGYHWCQEIRKVSKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDQNVLLAKIQGLLRRSYEFGKDQSLLEYMGVILNLKAMDLVYQGEVVSLTKNEFQIL
QVLFDHAGNIVSREDLMKELWNSDFFIDDNTLSVNVARLRKKLEAVGLKDFIETKKGVGYGLRHDG

Nucleotide


Download         Length: 681 bp        

>NTDB_id=186798 A6J87_RS09120 WP_004182305.1 1895759..1896439(+) (braR) [Streptococcus salivarius strain FDAARGOS_259]
ATGCATAAGATTTTATTAGTGGAGGACGACGAGGTTATCCGTCAACAAGTCAAAAAAATGCTAGAACAGTGGGGTTACGA
AGTTGTTCTTGTTGAAGATTTCATGGAAGTATTATCTATTTTTGTAAAAGTAGAGCCCCACTTGGTTCTTATGGATATTG
GTTTACCTCTATTCAACGGTTATCATTGGTGTCAGGAAATTCGTAAGGTCTCCAAGGTGCCTATTATGTTCTTGTCTTCC
AGAGATCAGGCCATGGATATTGTTATGGCAATCAACATGGGTGGGGACGACTTTGTGACTAAACCTTTTGACCAAAATGT
TCTCCTAGCAAAAATTCAAGGGCTTTTGCGTCGTTCTTATGAGTTTGGTAAGGATCAGAGTCTCTTGGAATATATGGGTG
TGATTCTGAACCTTAAGGCCATGGATTTGGTTTATCAGGGAGAGGTCGTTTCTTTGACAAAGAATGAGTTTCAGATTTTA
CAAGTTCTTTTCGATCATGCTGGTAATATCGTTAGTCGGGAAGACCTGATGAAGGAGCTTTGGAATAGTGACTTCTTTAT
TGATGACAATACCTTGTCAGTTAATGTAGCTCGTTTACGTAAGAAGTTAGAGGCAGTGGGTTTGAAGGATTTTATTGAAA
CCAAGAAAGGTGTTGGCTACGGGTTGCGTCATGATGGGTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)

Response regulator receiver domain (Response_reg)

(4-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

52.294

96.46

0.504
  micA Streptococcus pneumoniae Cp1015

35.043

100

0.363