Detailed information NTG0186763

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: VSVS12_RS08725
• Genome accession: NZ_CP016307
• Coordinates: 1951527..1952996 (+)
• Length: 489 a.a.
• NCBI ID: WP_065430414.1
• Uniprot ID: -
• Organism: Vibrio scophthalmi strain VS-12
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 1946527..1957996

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VSVS12_RS08715 (VSVS12_01770)	-	1948475..1949167 (+)	693	WP_065430412.1	tyrosine-protein kinase family protein	-
VSVS12_RS08720 (VSVS12_01771)	-	1949188..1951491 (+)	2304	WP_065430413.1	response regulator	-
VSVS12_RS08725 (VSVS12_01772)	luxO	1951527..1952996 (+)	1470	WP_065430414.1	sigma-54-dependent transcriptional regulator	Regulator
VSVS12_RS08730 (VSVS12_01773)	-	1952974..1954041 (+)	1068	WP_065430415.1	glycosyltransferase family 4 protein	-
VSVS12_RS08735 (VSVS12_01774)	-	1954164..1955378 (+)	1215	WP_065430416.1	glycosyltransferase	-
VSVS12_RS08740 (VSVS12_01775)	-	1955535..1956566 (+)	1032	WP_231893243.1	glycosyltransferase	-

Sequence

Protein

• Length: 489 a.a.
• Molecular weight: 54942.79 Da
• Isoelectric Point: 5.8467

>NTDB_id=186763 VSVS12_RS08725 WP_065430414.1 1951527..1952996(+) (luxO) [Vibrio scophthalmi strain VS-12]
MKSKVLLIEDSTSLAVLYQQYVKDEPFDLFYVETGREAIAFIERNVPQLVILDLKLPDMDGQDILDWIVENQVPTSVIVA
TAHGSVDVAVNLLQKGAKDFIEKPIKADRLKTSINLHLQRAKLEDLVENIESKFDRQRFHGFIGSSLPMQGVYKIIDSVA
PTTASVFIIGESGTGKEVCAEAIHKESKRRDKPFIAINCGAIPKDLMESEIFGHLKGAFTGATTDRKGAATAANGGTMFL
DELCEMDLEMQKKLLRFLQTGTFTPLGANKEQKVDVRIICATNRDPLVEVEEGRFREDLYYRVHVVPIEMPPLRERGGDI
ATLATHFLKLYAKQDQKKFRTINKDAEAILRRYAWPGNVRQLQNILRNIVVLNNDERLAVEHLPAQVVQLRKAASVTRTA
SVDNHPSPAAQEHIVNETNHTATLQSESSNVSESTIRPMWQIERETIQQAIELCDGNVLNAAVLLELSPSTVYRKKQAWE
TEDEQNFVQ

Nucleotide

• Length: 1470 bp

>NTDB_id=186763 VSVS12_RS08725 WP_065430414.1 1951527..1952996(+) (luxO) [Vibrio scophthalmi strain VS-12]
ATGAAATCAAAAGTACTTTTAATCGAAGATTCGACCTCACTGGCAGTGTTGTATCAGCAGTATGTCAAAGACGAGCCTTT
TGACCTTTTTTACGTTGAAACAGGCCGTGAAGCGATCGCATTTATTGAGCGCAACGTCCCTCAGTTGGTGATCCTTGATC
TCAAGTTACCTGATATGGATGGCCAAGACATTCTCGACTGGATTGTTGAAAATCAAGTGCCAACGTCTGTGATTGTCGCG
ACCGCGCACGGTTCGGTTGATGTTGCCGTCAACTTACTACAGAAAGGCGCTAAAGACTTTATAGAAAAACCAATCAAAGC
CGACCGTTTGAAGACATCGATTAATCTGCACCTTCAACGTGCCAAACTCGAAGATTTGGTTGAAAACATTGAGAGCAAAT
TTGATCGCCAACGCTTCCATGGTTTTATTGGTAGTAGCCTACCGATGCAAGGTGTTTATAAAATAATCGACTCTGTAGCC
CCAACCACCGCCAGTGTGTTTATTATCGGCGAAAGTGGTACCGGTAAAGAAGTGTGCGCTGAAGCGATTCATAAAGAGAG
TAAACGCCGTGATAAGCCGTTTATCGCAATCAACTGTGGCGCAATTCCTAAAGACTTGATGGAAAGTGAGATTTTTGGTC
ATCTAAAAGGGGCATTTACCGGAGCAACAACCGATAGAAAAGGCGCAGCGACAGCAGCCAATGGCGGCACTATGTTCCTT
GATGAGCTGTGCGAAATGGACTTGGAAATGCAGAAAAAATTGCTGCGTTTTCTCCAAACAGGCACGTTTACTCCTCTGGG
TGCCAACAAGGAACAAAAAGTCGATGTTCGCATTATTTGTGCGACCAACCGCGATCCTCTTGTGGAGGTTGAAGAAGGCC
GATTTAGAGAAGATTTATATTACCGCGTACATGTTGTGCCGATTGAAATGCCCCCACTACGCGAGCGCGGTGGTGACATT
GCCACACTTGCCACCCATTTTCTAAAACTGTACGCGAAGCAAGACCAGAAAAAATTCCGCACTATCAATAAAGACGCAGA
AGCGATCTTAAGACGTTACGCATGGCCAGGTAACGTGCGTCAATTACAGAACATACTGCGTAATATTGTCGTGCTCAATA
ACGATGAGCGTTTAGCGGTGGAGCATTTACCGGCACAAGTGGTGCAATTACGAAAAGCTGCCAGCGTAACGCGAACGGCC
AGTGTCGATAATCACCCTTCCCCTGCCGCTCAAGAGCATATTGTGAATGAAACAAATCACACCGCCACATTACAAAGCGA
GAGTTCCAATGTCAGTGAGTCGACCATTCGACCCATGTGGCAGATTGAACGTGAAACCATTCAGCAAGCGATTGAACTGT
GTGATGGCAACGTGCTCAATGCAGCTGTACTACTCGAACTGAGCCCTTCTACGGTTTACCGTAAAAAACAGGCTTGGGAA
ACAGAAGATGAACAAAACTTCGTCCAATGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (5-114)

• Bacterial regulatory protein, Fis family (HTH_8) (439-475)

• Sigma-54 interaction domain (Sigma54_activat) (143-309)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	51.266	96.933	0.497
pilR	Acinetobacter baumannii strain A118	37.037	99.387	0.368