Detailed information NTG0186757

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: A6J87_RS05955
• Genome accession: NZ_CP020451
• Coordinates: 1159437..1159865 (+)
• Length: 142 a.a.
• NCBI ID: WP_263969676.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain FDAARGOS_259
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1154437..1164865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J87_RS05920 (A6J87_05895)	-	1155416..1155850 (+)	435	WP_080611722.1	phage holin family protein	-
A6J87_RS05925 (A6J87_05900)	-	1155843..1156073 (+)	231	WP_080611725.1	phage holin	-
A6J87_RS05930 (A6J87_05905)	-	1156078..1156530 (+)	453	WP_080611727.1	hypothetical protein	-
A6J87_RS05935 (A6J87_05910)	-	1156544..1156873 (+)	330	WP_080611728.1	hypothetical protein	-
A6J87_RS05940 (A6J87_05915)	-	1156878..1157150 (+)	273	WP_080611730.1	hypothetical protein	-
A6J87_RS05945 (A6J87_05920)	-	1157169..1158554 (+)	1386	WP_080611731.1	GH25 family lysozyme	-
A6J87_RS05950 (A6J87_05925)	comGC	1159175..1159477 (+)	303	WP_080611741.1	competence type IV pilus major pilin ComGC	Machinery gene
A6J87_RS05955 (A6J87_05930)	comGD	1159437..1159865 (+)	429	WP_263969676.1	competence type IV pilus minor pilin ComGD	Machinery gene
A6J87_RS05960 (A6J87_05935)	comGE	1159837..1160127 (+)	291	WP_080611745.1	competence type IV pilus minor pilin ComGE	Machinery gene
A6J87_RS05965 (A6J87_05940)	comGF	1160114..1160551 (+)	438	WP_080611747.1	competence type IV pilus minor pilin ComGF	Machinery gene
A6J87_RS05970 (A6J87_05945)	comGG	1160529..1160846 (+)	318	WP_060973072.1	competence type IV pilus minor pilin ComGG	Machinery gene
A6J87_RS05975 (A6J87_05950)	comGH	1160891..1161847 (+)	957	WP_080611749.1	class I SAM-dependent methyltransferase	Machinery gene
A6J87_RS05980 (A6J87_05955)	-	1161904..1163097 (+)	1194	WP_073689934.1	acetate kinase	-
A6J87_RS05985 (A6J87_05960)	-	1163348..1163545 (+)	198	WP_013991261.1	helix-turn-helix transcriptional regulator	-
A6J87_RS05990 (A6J87_05965)	-	1163557..1164213 (+)	657	WP_064523497.1	CPBP family intramembrane glutamic endopeptidase	-
A6J87_RS05995 (A6J87_05970)	-	1164291..1164737 (+)	447	WP_013991259.1	hypothetical protein	-

Sequence

Protein

• Length: 142 a.a.
• Molecular weight: 15755.24 Da
• Isoelectric Point: 10.4237

>NTDB_id=186757 A6J87_RS05955 WP_263969676.1 1159437..1159865(+) (comGD) [Streptococcus salivarius strain FDAARGOS_259]
MRNMVAKAAQWPIRAFTLLESLVTLAVVAFLTLSLSGSVTGIFRQVETNLFYLRFEYLYRDSQRLAAAEGANVELQLTKD
KISNGKSSLVIPKNIHLDKGQTLVFDAKGGNSSLTKIRFSSDKEVVTYQLNMGSGKYKKTVS

Nucleotide

• Length: 429 bp

>NTDB_id=186757 A6J87_RS05955 WP_263969676.1 1159437..1159865(+) (comGD) [Streptococcus salivarius strain FDAARGOS_259]
ATGCGAAACATGGTGGCGAAAGCCGCTCAGTGGCCAATTAGAGCCTTTACCTTGTTGGAGAGTCTGGTGACACTAGCAGT
GGTTGCCTTTCTCACTCTGAGTTTGTCAGGCTCAGTAACAGGTATTTTTCGGCAGGTTGAGACTAATCTTTTTTATCTGC
GCTTTGAGTACCTATACCGAGATAGTCAGCGCTTGGCAGCGGCAGAAGGGGCCAATGTTGAATTGCAGTTGACCAAGGAT
AAAATCAGTAACGGAAAATCCAGTCTAGTGATTCCTAAAAATATTCATCTGGATAAGGGGCAGACGCTAGTGTTTGATGC
CAAAGGAGGTAACTCAAGCCTCACCAAGATTCGTTTTTCAAGTGATAAGGAGGTGGTGACCTATCAGCTTAACATGGGCA
GTGGTAAATATAAAAAGACGGTCTCTTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus mutans UA140	54.962	92.254	0.507
comGD	Streptococcus mutans UA159	54.962	92.254	0.507
comGD	Streptococcus gordonii str. Challis substr. CH1	42.143	98.592	0.415
comGD/cglD	Streptococcus pneumoniae Rx1	45.669	89.437	0.408
comGD/cglD	Streptococcus pneumoniae D39	45.669	89.437	0.408
comGD/cglD	Streptococcus pneumoniae R6	45.669	89.437	0.408
comGD/cglD	Streptococcus mitis NCTC 12261	45.669	89.437	0.408
comGD/cglD	Streptococcus mitis SK321	44.882	89.437	0.401
comGD/cglD	Streptococcus pneumoniae TIGR4	44.882	89.437	0.401
comGD	Lactococcus lactis subsp. cremoris KW2	40.909	92.958	0.38