Detailed information NTG0186749

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: A6J87_RS04850
• Genome accession: NZ_CP020451
• Coordinates: 966689..967789 (-)
• Length: 366 a.a.
• NCBI ID: WP_060971642.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain FDAARGOS_259
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 961689..972789

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J87_RS04835 (A6J87_04820)	-	962535..963407 (-)	873	WP_037599377.1	YitT family protein	-
A6J87_RS04840 (A6J87_04825)	trpS	963838..964860 (+)	1023	WP_070577137.1	tryptophan--tRNA ligase	-
A6J87_RS04845 (A6J87_04830)	guaB	965039..966520 (+)	1482	WP_070577135.1	IMP dehydrogenase	-
A6J87_RS04850 (A6J87_04835)	recF	966689..967789 (-)	1101	WP_060971642.1	DNA replication/repair protein RecF	Machinery gene
A6J87_RS04855 (A6J87_04840)	yaaA	967792..968169 (-)	378	WP_002892188.1	S4 domain-containing protein YaaA	-
A6J87_RS04860 (A6J87_04845)	yfmF	968247..969497 (+)	1251	WP_080611643.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
A6J87_RS04865 (A6J87_04850)	yfmH	969499..970776 (+)	1278	WP_080611645.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
A6J87_RS04870 (A6J87_04855)	-	970835..971692 (+)	858	WP_070577130.1	helix-turn-helix transcriptional regulator	-
A6J87_RS04875 (A6J87_04860)	pgsA	971705..972247 (+)	543	WP_070475423.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42089.15 Da
• Isoelectric Point: 8.1792

>NTDB_id=186749 A6J87_RS04850 WP_060971642.1 966689..967789(-) (recF) [Streptococcus salivarius strain FDAARGOS_259]
MWLENIDIQHFRNYTEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTRSDKELIQFQQNTLKLNGIVHRHSGK
LPLEISLSNKGRITKVNHLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSSYNHVLKQR
NAYLKSTDNVDINFLSVLDEQLSDFGARVIEHRLEFIKQLEEEADRHHSNLSNQIERLKISYESNIPFGNNKVIRESFLT
TLKQNHKRDIFKKNTGVGPHRDDLTFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTGEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPDLKTFLVKNGIICEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=186749 A6J87_RS04850 WP_060971642.1 966689..967789(-) (recF) [Streptococcus salivarius strain FDAARGOS_259]
ATGTGGCTCGAAAATATTGATATTCAACACTTTAGAAATTATACTGAAGCCTCTGTGAGCTTCTCACCTCATCTCAATAT
TTTTCTTGGTCGCAATGCTCAAGGAAAAACAAATATTCTTGAGGCCATCTATTTTCTAGCATTGACACGTAGTCATCGGA
CCCGTTCAGATAAGGAACTGATTCAATTTCAGCAAAATACTCTCAAACTGAATGGCATCGTGCATCGTCATAGTGGAAAG
CTACCTCTGGAAATCAGTTTATCTAATAAAGGCCGCATAACAAAGGTCAACCACCTCAAACAAGCTAAATTATCCGATTA
TATCGGTCACATGACAGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAGGGATCTCCAAGCCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTTTCAGACCTATCAAGTTATAATCATGTACTCAAGCAACGT
AATGCCTATCTCAAATCTACTGACAATGTAGACATTAATTTTCTCTCAGTGTTAGATGAACAGCTTTCCGATTTTGGAGC
ACGCGTTATCGAACATAGACTAGAATTTATCAAGCAATTAGAGGAAGAGGCAGATAGACATCATAGTAATCTCTCAAATC
AGATAGAGCGCCTTAAAATCTCCTACGAATCTAATATCCCATTCGGGAATAACAAAGTTATTCGTGAATCATTTTTAACC
ACGTTAAAGCAAAATCACAAAAGGGATATCTTCAAAAAGAACACTGGTGTTGGTCCACATAGGGATGATTTGACATTTTA
CATTAATGACATGAACGCATCTTTCGGCAGTCAGGGGCAACAACGTAGTCTCATTCTTTCTTTAAAAATGGCTGAGATTG
CTCTGATAAAAAAAGTAACAGGTGAATTTCCAATTCTTCTCCTCGATGATGTCATGAGTGAGCTTGACAATCACCGTCAA
CTCAAACTGTTAGAAAGTATTGACGAAGAGGTTCAAACCTTCATGACGACAACTTCACTTGATCATCTGAGTAACCTACC
ACCCGATTTAAAGACCTTCTTAGTCAAGAATGGTATTATTTGTGAAAAACAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-345)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.084	97.814	0.637
recF	Bacillus subtilis subsp. subtilis str. 168	43.935	100	0.445