Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   A6J87_RS04790 Genome accession   NZ_CP020451
Coordinates   954200..954967 (-) Length   255 a.a.
NCBI ID   WP_037598566.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_259     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 949200..959967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J87_RS04770 (A6J87_04755) ychF 949738..950853 (-) 1116 WP_002883967.1 redox-regulated ATPase YchF -
  A6J87_RS04775 (A6J87_04760) - 951063..951254 (-) 192 WP_002883961.1 DUF951 domain-containing protein -
  A6J87_RS04780 (A6J87_04765) dnaN 951306..952442 (-) 1137 WP_105257715.1 DNA polymerase III subunit beta -
  A6J87_RS04785 (A6J87_04770) dnaA 952597..953961 (-) 1365 WP_037599382.1 chromosomal replication initiator protein DnaA -
  A6J87_RS04790 (A6J87_04775) spo0J 954200..954967 (-) 768 WP_037598566.1 ParB/RepB/Spo0J family partition protein Regulator
  A6J87_RS04795 (A6J87_04780) htrA 955033..956268 (-) 1236 WP_070577144.1 S1C family serine protease Regulator
  A6J87_RS04800 (A6J87_04785) rlmH 956474..956953 (+) 480 WP_037598563.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  A6J87_RS04805 (A6J87_04790) - 956970..957653 (+) 684 WP_070577141.1 YoaK family protein -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29379.81 Da        Isoelectric Point: 9.4081

>NTDB_id=186747 A6J87_RS04790 WP_037598566.1 954200..954967(-) (spo0J) [Streptococcus salivarius strain FDAARGOS_259]
MQEQLKALPISEIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVSDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPKEIQTSIENGKLSQG
HARALLSVEDTQKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=186747 A6J87_RS04790 WP_037598566.1 954200..954967(-) (spo0J) [Streptococcus salivarius strain FDAARGOS_259]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGAAATCTACCCAAATCCTTTTCAACCTCGTATAGAATTCTCTGATGA
AGAATTAGCAGAACTAAGCCAATCAATCGCTGAAAATGGACTGATACAGCCAATCATTGTCCGAAAATCGGACATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTGGGAATGACAGAAATCCCTGCAGTCGTAAAG
GAAGTCTCAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGCTCGAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGTTAGCTTACAGTCACGAGGAACTGGCAAAAGCTATGGGGAAATCCAGGCCCT
ATATCAGTAACGCTCTCAGACTCCTCCAACTTCCCAAAGAGATACAGACAAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCGCTTTTATCTGTTGAGGATACCCAAAAGCAATTAACTATCTATCATCAGGTGCTTACTGAAAAATGGTC
CGTTCGTACTCTGGAAAAAAGACTTCAAGAACTTCCTAAAAAACAAAAATCAAAAAAAGATATTCACATAAAAGATAAAG
AAAAAGAACTAGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACGGAAGAAGATTTTAACAGAATTATCAACAAGCTAATTTGA

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.039

100

0.58