Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   A6J87_RS04795 Genome accession   NZ_CP020451
Coordinates   955033..956268 (-) Length   411 a.a.
NCBI ID   WP_070577144.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_259     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 950033..961268
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J87_RS04775 (A6J87_04760) - 951063..951254 (-) 192 WP_002883961.1 DUF951 domain-containing protein -
  A6J87_RS04780 (A6J87_04765) dnaN 951306..952442 (-) 1137 WP_105257715.1 DNA polymerase III subunit beta -
  A6J87_RS04785 (A6J87_04770) dnaA 952597..953961 (-) 1365 WP_037599382.1 chromosomal replication initiator protein DnaA -
  A6J87_RS04790 (A6J87_04775) spo0J 954200..954967 (-) 768 WP_037598566.1 ParB/RepB/Spo0J family partition protein Regulator
  A6J87_RS04795 (A6J87_04780) htrA 955033..956268 (-) 1236 WP_070577144.1 S1C family serine protease Regulator
  A6J87_RS04800 (A6J87_04785) rlmH 956474..956953 (+) 480 WP_037598563.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  A6J87_RS04805 (A6J87_04790) - 956970..957653 (+) 684 WP_070577141.1 YoaK family protein -
  A6J87_RS04825 (A6J87_04810) - 958202..960796 (-) 2595 WP_070577140.1 YfhO family protein -

Sequence


Protein


Download         Length: 411 a.a.        Molecular weight: 42958.16 Da        Isoelectric Point: 4.6739

>NTDB_id=186748 A6J87_RS04795 WP_070577144.1 955033..956268(-) (htrA) [Streptococcus salivarius strain FDAARGOS_259]
MKKFNWKKIVAPIAMLVIGLLGGLLGAFILLTAAGVSFTNTTDTGVKTAKTVYNNTTDTTKAVKKVQNAVVSVINYQEGS
SSDSLNELYGRIFGGDDSSDSSQDKSKDSDGLQVAGEGSGVIYKKDGKEAYIVTNNHVVDGAKKLEIMLSDGSKITGELV
GKDTYSDLAVVKVSSDKIKTVAEFADSNSLTVGEKAIAIGSPLGTEYANSVTEGIVSSLSRTVTMQNDNGETVSTNAIQT
DAAINPGNSGGALVNIEGQVIGINSSKISSTSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISMADLNSLS
SSATSKLDLPDEVKSGVVVGSVQKGMPADGKLQENDVITQIDGKEISSKTDIQTNLYSHSIGDTIKVTFYRGKEKKTEEL
KLTKSTEDLSD

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=186748 A6J87_RS04795 WP_070577144.1 955033..956268(-) (htrA) [Streptococcus salivarius strain FDAARGOS_259]
GTGAAAAAATTTAACTGGAAAAAAATAGTAGCGCCAATTGCAATGCTTGTTATTGGCTTACTAGGTGGTCTACTAGGTGC
CTTTATCCTATTAACAGCAGCAGGGGTATCTTTTACCAATACAACAGATACAGGTGTTAAAACAGCTAAGACCGTATATA
ACAATACAACAGATACAACTAAGGCCGTTAAGAAAGTACAAAATGCCGTTGTTTCTGTCATCAATTACCAAGAAGGCTCA
TCTTCAGATTCCCTAAATGAACTTTATGGTCGTATTTTTGGTGGAGATGATAGTTCTGATTCTAGCCAAGACAAATCAAA
AGATTCTGATGGATTGCAAGTCGCTGGTGAAGGTTCCGGTGTTATCTATAAAAAAGATGGGAAAGAGGCCTACATCGTAA
CCAACAACCACGTTGTTGATGGTGCTAAAAAACTTGAAATCATGCTTTCAGATGGATCAAAAATTACTGGTGAACTCGTT
GGTAAAGATACTTACTCTGACCTAGCAGTTGTCAAAGTTTCTTCAGATAAAATAAAAACCGTCGCAGAATTTGCAGATTC
AAACTCCCTCACAGTTGGTGAAAAGGCAATTGCTATCGGTAGCCCACTTGGTACCGAATACGCCAACTCAGTAACAGAGG
GAATCGTATCTAGCCTTAGCCGTACCGTAACTATGCAAAACGACAATGGTGAAACTGTCTCAACAAATGCTATCCAAACA
GATGCTGCCATTAACCCTGGTAACTCTGGTGGTGCCTTAGTCAATATTGAAGGACAAGTTATCGGTATTAATTCAAGTAA
GATTTCATCAACGTCAGCAGTCGCTGGTAGTGCCGTTGAAGGTATGGGATTCGCCATTCCATCAAACGATGTTGTCGAAA
TCATTAATCAATTGGAAAAAGACGGTAAAGTTACACGCCCAGCCCTAGGAATCTCAATGGCCGATCTTAATAGCCTTTCT
AGCAGTGCAACTTCTAAATTAGATTTACCAGATGAAGTTAAATCTGGAGTTGTTGTCGGTAGCGTTCAAAAAGGTATGCC
AGCTGACGGTAAACTTCAAGAAAATGATGTTATTACTCAAATTGACGGTAAGGAAATCAGCTCAAAAACTGATATTCAAA
CCAATCTTTACAGCCATAGTATCGGAGATACAATCAAGGTAACCTTCTATCGTGGTAAAGAGAAGAAAACTGAAGAACTT
AAATTAACAAAATCTACAGAAGACTTATCTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.538

98.054

0.603

  htrA Streptococcus gordonii str. Challis substr. CH1

57.524

100

0.577

  htrA Streptococcus mitis NCTC 12261

54.768

99.513

0.545

  htrA Streptococcus pneumoniae TIGR4

54.523

99.513

0.543

  htrA Streptococcus pneumoniae D39

54.523

99.513

0.543

  htrA Streptococcus pneumoniae Rx1

54.523

99.513

0.543

  htrA Streptococcus pneumoniae R6

54.523

99.513

0.543


Multiple sequence alignment