Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   A6J72_RS03155 Genome accession   NZ_CP020433
Coordinates   639504..640280 (+) Length   258 a.a.
NCBI ID   WP_082311760.1    Uniprot ID   -
Organism   Streptococcus intermedius strain FDAARGOS_233     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 634504..645280
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J72_RS03130 (A6J72_03125) - 635012..635266 (-) 255 WP_003073643.1 DUF1912 family protein -
  A6J72_RS03135 (A6J72_03130) - 635277..636629 (-) 1353 WP_082311756.1 DUF438 domain-containing protein -
  A6J72_RS03140 (A6J72_03135) - 636629..636862 (-) 234 WP_082311757.1 DUF1858 domain-containing protein -
  A6J72_RS03145 (A6J72_03140) rlmD 637227..638606 (-) 1380 WP_082311758.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  A6J72_RS03150 (A6J72_03145) - 638663..639439 (+) 777 WP_105255917.1 aminoglycoside 3'-phosphotransferase -
  A6J72_RS03155 (A6J72_03150) recX 639504..640280 (+) 777 WP_082311760.1 recombination regulator RecX Regulator
  A6J72_RS03160 (A6J72_03155) - 640367..640900 (+) 534 WP_082311761.1 DUF402 domain-containing protein -
  A6J72_RS03165 (A6J72_03160) - 641020..641337 (+) 318 WP_009568141.1 DUF960 domain-containing protein -
  A6J72_RS03170 (A6J72_03165) - 641457..641849 (-) 393 WP_014829583.1 S1 RNA-binding domain-containing protein -
  A6J72_RS03175 (A6J72_03170) - 641851..643251 (-) 1401 WP_102570638.1 bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase -
  A6J72_RS03180 (A6J72_03175) vraR 643291..643923 (-) 633 WP_082311762.1 response regulator transcription factor Regulator
  A6J72_RS03185 (A6J72_03180) - 643925..644920 (-) 996 WP_082311763.1 sensor histidine kinase -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30395.98 Da        Isoelectric Point: 9.0671

>NTDB_id=186399 A6J72_RS03155 WP_082311760.1 639504..640280(+) (recX) [Streptococcus intermedius strain FDAARGOS_233]
MKITKIEKKKRLYLLELDETDKLYITEDTIVHFMLSKGMNISEQELKEIQDYAQFSYGKNLALYYLSFKQRTVKEVRDYL
TKHEISLDTIEKVLTILIKDNWIDDRQYAYSFIHSNLLSGDKGAFVLKQKLTQKGITAPIIDEELCKFDFTEVSQKVAAK
LLRNYQSKLPSKALQDKILQSMMNKGFSYTEAKAAYQTLDIKEDEETQQKLLYKELDKQYHKYSKKYDGYELKQRLTQAL
ARKGYDFSDIASALREYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=186399 A6J72_RS03155 WP_082311760.1 639504..640280(+) (recX) [Streptococcus intermedius strain FDAARGOS_233]
ATGAAAATCACTAAAATTGAAAAGAAAAAGCGTCTCTATCTTTTAGAATTGGACGAAACTGACAAACTTTACATCACTGA
AGATACTATCGTTCACTTTATGTTATCAAAAGGCATGAATATCAGTGAGCAAGAATTAAAAGAAATTCAGGACTACGCAC
AGTTTTCTTACGGAAAAAATCTAGCTCTATATTATCTTTCTTTCAAGCAAAGAACTGTCAAAGAAGTGCGGGATTATTTG
ACAAAACACGAGATTTCCTTAGATACCATCGAGAAAGTGCTAACGATTCTCATAAAAGATAACTGGATAGATGACAGACA
ATATGCTTATTCCTTTATTCATTCCAATCTTCTATCTGGTGATAAAGGTGCTTTTGTCCTCAAGCAAAAATTGACTCAAA
AAGGTATCACAGCTCCTATTATTGATGAAGAATTATGCAAATTTGATTTTACAGAAGTAAGTCAAAAAGTCGCTGCAAAA
CTACTCCGCAACTATCAAAGCAAACTACCAAGTAAGGCCCTGCAGGATAAAATTCTTCAATCTATGATGAACAAAGGCTT
TTCCTATACTGAAGCTAAGGCAGCTTATCAAACCTTAGACATCAAAGAAGATGAGGAAACTCAGCAGAAATTACTGTACA
AAGAATTAGATAAGCAATACCACAAATATTCTAAAAAATATGACGGATATGAATTAAAACAACGCCTCACCCAAGCACTC
GCTCGCAAAGGCTACGATTTTTCTGATATTGCTAGCGCTCTCAGAGAATATCTATAA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.094

100

0.36