Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   A6J72_RS00435 Genome accession   NZ_CP020433
Coordinates   80477..80947 (+) Length   156 a.a.
NCBI ID   WP_003072602.1    Uniprot ID   -
Organism   Streptococcus intermedius strain FDAARGOS_233     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 75477..85947
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J72_RS00420 (A6J72_00425) - 77633..78346 (+) 714 WP_082311475.1 DUF805 domain-containing protein -
  A6J72_RS00425 (A6J72_00430) - 78786..79772 (+) 987 WP_082311476.1 Gfo/Idh/MocA family protein -
  A6J72_RS00430 (A6J72_00435) - 79797..80450 (+) 654 WP_021002684.1 uracil-DNA glycosylase -
  A6J72_RS00435 (A6J72_00440) mutX 80477..80947 (+) 471 WP_003072602.1 8-oxo-dGTP diphosphatase Machinery gene
  A6J72_RS00440 (A6J72_00445) - 80959..82233 (+) 1275 WP_003072603.1 dihydroorotase -
  A6J72_RS00445 (A6J72_00450) metK 82504..83694 (+) 1191 WP_082311477.1 methionine adenosyltransferase -
  A6J72_RS00450 (A6J72_00455) - 84031..85290 (+) 1260 WP_082311478.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  A6J72_RS00455 (A6J72_00460) - 85369..85920 (+) 552 WP_082311479.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 18147.62 Da        Isoelectric Point: 4.5298

>NTDB_id=186372 A6J72_RS00435 WP_003072602.1 80477..80947(+) (mutX) [Streptococcus intermedius strain FDAARGOS_233]
MVKLATICYVDNGKEFLMLHRNKKPNDVHAGKWIGVGGKLENGETPQECAVREIFEETGLRVKKPILKGIITFPEFTPNH
DWYTYVFKVTEFEGELIDCDEGTLEWVPYEQVLSRPTWEGDLTFISWILEEKPFFSAKFSYKGETLVESHVDFYED

Nucleotide


Download         Length: 471 bp        

>NTDB_id=186372 A6J72_RS00435 WP_003072602.1 80477..80947(+) (mutX) [Streptococcus intermedius strain FDAARGOS_233]
ATGGTTAAATTAGCAACGATTTGCTATGTGGACAATGGAAAAGAATTTCTGATGTTACATCGAAATAAAAAGCCCAATGA
TGTCCATGCTGGCAAATGGATTGGTGTTGGTGGAAAATTAGAAAATGGAGAAACACCACAGGAGTGTGCTGTCCGAGAAA
TCTTTGAAGAGACGGGATTGCGCGTGAAAAAGCCGATATTAAAAGGTATTATCACTTTTCCAGAGTTTACCCCGAACCAT
GACTGGTACACTTATGTATTTAAAGTGACAGAGTTTGAGGGAGAACTGATTGACTGCGATGAAGGTACTTTAGAATGGGT
ACCTTATGAACAAGTTCTATCTAGACCAACTTGGGAGGGAGATCTTACTTTTATATCTTGGATTTTAGAAGAAAAACCGT
TTTTCTCGGCCAAATTTTCTTACAAAGGAGAGACGTTAGTGGAGAGCCATGTTGATTTTTATGAAGATTAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(5-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

78.71

99.359

0.782

Multiple sequence alignment