Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   A4W79_RS05980 Genome accession   NZ_CP016221
Coordinates   1162173..1163444 (-) Length   423 a.a.
NCBI ID   WP_076787225.1    Uniprot ID   -
Organism   Latilactobacillus curvatus strain TMW 1.421     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1157173..1168444
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A4W79_RS05975 (A4W79_05920) - 1160426..1162147 (-) 1722 WP_064777286.1 proline--tRNA ligase -
  A4W79_RS05980 (A4W79_05925) eeP 1162173..1163444 (-) 1272 WP_076787225.1 RIP metalloprotease RseP Regulator
  A4W79_RS05985 (A4W79_05930) - 1163832..1164620 (-) 789 WP_076787223.1 phosphatidate cytidylyltransferase -
  A4W79_RS05990 (A4W79_05935) - 1164635..1165387 (-) 753 WP_004265407.1 isoprenyl transferase -

Sequence

Protein


Download         Length: 423 a.a.        Molecular weight: 45981.67 Da        Isoelectric Point: 9.9118

>NTDB_id=186322 A4W79_RS05980 WP_076787225.1 1162173..1163444(-) (eeP) [Latilactobacillus curvatus strain TMW 1.421]
MAAIIAFIIIFGILVVVHEFGHFYMAKRSGILVREFSIGMGPKLFATRKNGTTYTIRWLPLGGYVRMAGMADDESEIEAG
TQATLLLDEQETVQKINTSDKVTTLNGVPFQIAKTDLQKELWIEGYESGDESELKRYSVSHDATIVESDGTEVQIAPVDV
QFQSASLINRMLTNFAGPFNNFILAIVAFALFAFLNGGVPQNKAIVGTVMPNSPAQKAGLKTDDRLVKVAGKKVTTFTDF
SSVIAKYPNKPVNVQVKRAKQTKSLEITPKAVKVEGQKGKVGQIGVTAGLNHSVGAKLKYGFTQSWANATQIFKILGSFL
TGGFSLNKLAGPVGMYSMTTQFASQGFTMLVYFLAFLSVNLGIMNLIPIPALDGGKLVINVIEAIRGKPISPEKEGIVTL
VGVGMMVVLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=186322 A4W79_RS05980 WP_076787225.1 1162173..1163444(-) (eeP) [Latilactobacillus curvatus strain TMW 1.421]
TTGGCGGCGATTATTGCGTTTATTATCATATTTGGCATTTTAGTAGTGGTGCATGAATTTGGCCACTTTTACATGGCGAA
ACGTTCTGGTATTTTGGTGCGTGAATTTTCAATTGGCATGGGGCCAAAATTATTTGCAACGCGCAAAAATGGCACGACTT
ATACGATTCGTTGGTTACCACTTGGCGGCTATGTCCGCATGGCAGGGATGGCGGATGATGAATCTGAAATCGAAGCCGGC
ACGCAAGCAACCTTGCTGTTAGACGAACAAGAAACTGTTCAAAAAATTAATACAAGTGACAAAGTAACCACGTTAAACGG
TGTCCCATTTCAAATTGCAAAAACTGACTTGCAAAAAGAATTATGGATTGAAGGCTATGAAAGTGGTGATGAATCCGAAT
TAAAACGTTATTCGGTCAGTCACGATGCAACGATTGTTGAATCAGACGGAACGGAAGTGCAAATCGCACCCGTGGATGTT
CAATTCCAGTCGGCTAGTTTAATCAATCGGATGTTGACCAACTTCGCAGGACCGTTCAACAACTTTATCCTTGCGATTGT
GGCGTTTGCGCTCTTTGCTTTTTTAAACGGTGGCGTCCCACAAAACAAAGCGATTGTTGGCACAGTGATGCCAAACTCGC
CAGCACAAAAAGCCGGGCTTAAAACGGATGACCGGTTAGTGAAAGTTGCTGGCAAAAAAGTCACGACGTTTACTGATTTC
AGCTCGGTGATTGCAAAATATCCGAATAAACCAGTGAATGTCCAGGTTAAACGGGCAAAGCAAACTAAGTCACTCGAAAT
CACACCTAAAGCGGTGAAAGTCGAGGGACAAAAGGGGAAAGTCGGCCAAATTGGTGTGACAGCTGGACTCAACCATAGCG
TGGGGGCTAAGTTGAAATATGGCTTCACCCAATCATGGGCGAATGCGACCCAGATTTTTAAAATTCTCGGGTCATTCTTA
ACGGGTGGTTTTTCACTCAATAAACTAGCCGGACCAGTCGGCATGTATTCAATGACGACCCAATTCGCGAGTCAAGGCTT
TACAATGCTCGTCTACTTCTTAGCGTTCTTATCCGTCAACTTGGGGATTATGAACCTGATTCCAATTCCGGCCCTCGATG
GTGGTAAGCTCGTGATCAACGTGATTGAAGCGATTCGCGGTAAACCCATCTCACCGGAAAAAGAAGGCATTGTCACCCTT
GTCGGGGTCGGCATGATGGTCGTCTTAATGGTCTTGGTCACATGGAACGATATTCAACGCTTTTTCTTTTAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_6)

(205-258)

Peptidase family M50 (Peptidase_M50)

(6-409)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.14

100

0.489
  eeP Streptococcus thermophilus LMD-9

48.14

100

0.489

Multiple sequence alignment