Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | BAU07_RS02915 | Genome accession | NZ_CP016172 |
| Coordinates | 658343..659581 (+) | Length | 412 a.a. |
| NCBI ID | WP_066653952.1 | Uniprot ID | A0A193G9P9 |
| Organism | Bordetella flabilis strain AU10664 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 653343..664581
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAU07_RS02890 (BAU07_02890) | - | 655182..655565 (+) | 384 | WP_066653942.1 | MOSC N-terminal beta barrel domain-containing protein | - |
| BAU07_RS02895 (BAU07_02895) | - | 655611..656816 (-) | 1206 | WP_066653944.1 | benzoate/H(+) symporter BenE family transporter | - |
| BAU07_RS02900 (BAU07_02900) | - | 656821..657072 (-) | 252 | WP_066653946.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| BAU07_RS02905 (BAU07_02905) | coaD | 657218..657721 (-) | 504 | WP_066653948.1 | pantetheine-phosphate adenylyltransferase | - |
| BAU07_RS02910 (BAU07_02910) | rsmD | 657778..658344 (-) | 567 | WP_066653950.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| BAU07_RS02915 (BAU07_02915) | pilA | 658343..659581 (+) | 1239 | WP_066653952.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| BAU07_RS26650 | - | 659729..661618 (-) | 1890 | WP_084025200.1 | CYTH and CHAD domain-containing protein | - |
| BAU07_RS02925 (BAU07_02925) | ribBA | 661960..663138 (+) | 1179 | WP_066653954.1 | bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II | - |
| BAU07_RS02930 (BAU07_02930) | ribH | 663256..663780 (+) | 525 | WP_066653956.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| BAU07_RS02935 (BAU07_02935) | nusB | 663764..664252 (+) | 489 | WP_066653958.1 | transcription antitermination factor NusB | - |
Sequence
Protein
Download Length: 412 a.a. Molecular weight: 43035.34 Da Isoelectric Point: 6.3696
>NTDB_id=185973 BAU07_RS02915 WP_066653952.1 658343..659581(+) (pilA) [Bordetella flabilis strain AU10664]
MLRFFKKKPPAPVPEPAQAPPPADPAGQAAPVPAPSVDAPPAPPEATPAPPPWPQGHAEAIDLQDASAGVPQQSPVFPTP
APHTEAPLQPAAPVEAEAPAPAEPAAARTSWLQRLKQGLSRTGQSIGGLFVGVKVDENLFEELETALIMADAGMEATQKL
LTALRARVKKDRLEDATQVREALRQILADHLRPLERRFDLARAKPLVVMIAGVNGAGKTTSIGKLANTFQRQGASVLLAA
GDTFRAAAREQLMEWGARNNVTVIAQEGGDPAAVAFDAVNAARARGAGVVMVDTAGRLPTQLHLMEELKKIRRVIAKADS
AAPHEVLLVVDGNTGQNALAQIRAFDAAINLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPVPVYWIGVGERLEDLQPFVA
DEFAAALLGMSA
MLRFFKKKPPAPVPEPAQAPPPADPAGQAAPVPAPSVDAPPAPPEATPAPPPWPQGHAEAIDLQDASAGVPQQSPVFPTP
APHTEAPLQPAAPVEAEAPAPAEPAAARTSWLQRLKQGLSRTGQSIGGLFVGVKVDENLFEELETALIMADAGMEATQKL
LTALRARVKKDRLEDATQVREALRQILADHLRPLERRFDLARAKPLVVMIAGVNGAGKTTSIGKLANTFQRQGASVLLAA
GDTFRAAAREQLMEWGARNNVTVIAQEGGDPAAVAFDAVNAARARGAGVVMVDTAGRLPTQLHLMEELKKIRRVIAKADS
AAPHEVLLVVDGNTGQNALAQIRAFDAAINLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPVPVYWIGVGERLEDLQPFVA
DEFAAALLGMSA
Nucleotide
Download Length: 1239 bp
>NTDB_id=185973 BAU07_RS02915 WP_066653952.1 658343..659581(+) (pilA) [Bordetella flabilis strain AU10664]
ATGCTGAGATTCTTCAAGAAAAAACCGCCCGCGCCCGTCCCTGAACCGGCGCAGGCCCCCCCGCCCGCCGATCCGGCCGG
CCAGGCCGCACCCGTTCCCGCCCCGTCCGTCGACGCGCCCCCGGCACCTCCCGAGGCAACGCCAGCGCCGCCGCCCTGGC
CGCAGGGCCATGCCGAGGCCATCGACCTGCAGGATGCCTCCGCGGGCGTGCCGCAACAATCGCCCGTGTTCCCCACGCCG
GCCCCCCATACCGAAGCGCCCTTGCAGCCGGCGGCGCCGGTCGAGGCCGAAGCCCCCGCCCCAGCGGAGCCGGCGGCGGC
CAGGACGTCCTGGCTGCAACGCCTCAAGCAGGGCCTGTCGCGCACGGGCCAGAGCATTGGCGGCCTGTTCGTGGGCGTCA
AGGTCGACGAGAACCTCTTCGAGGAGCTCGAAACCGCGCTCATTATGGCCGATGCCGGTATGGAGGCCACGCAAAAGCTC
CTGACCGCGCTGCGCGCCCGGGTCAAGAAAGACCGCCTGGAAGACGCCACGCAGGTGCGCGAGGCCTTGCGGCAGATCCT
GGCCGACCACCTGCGGCCGCTGGAGCGTCGCTTCGACCTGGCGCGCGCCAAACCGCTGGTGGTCATGATTGCCGGCGTGA
ACGGGGCCGGCAAGACCACGTCGATCGGCAAGCTGGCCAATACCTTCCAGAGGCAGGGCGCCAGCGTCCTGCTCGCCGCC
GGGGATACCTTCCGCGCGGCGGCGCGCGAGCAGCTCATGGAATGGGGCGCCCGCAACAACGTCACGGTCATCGCCCAGGA
AGGCGGCGACCCGGCGGCGGTGGCTTTCGATGCGGTGAACGCCGCGCGCGCCCGGGGGGCGGGCGTGGTGATGGTGGATA
CGGCGGGCCGCCTGCCCACGCAGTTGCACCTGATGGAAGAGCTGAAGAAAATCCGGCGCGTGATCGCCAAGGCCGACAGC
GCGGCGCCGCATGAGGTCCTGCTGGTGGTCGACGGCAATACTGGCCAGAATGCGCTGGCCCAGATCCGCGCCTTCGATGC
CGCCATCAATCTCACCGGTCTGGTGGTCACCAAGCTGGACGGCACGGCCAAGGGCGGCACGCTGGCGGCCGTGGCGGCCG
GCAGCCAGGGCGTGCGCCCCGTGCCGGTGTACTGGATCGGCGTGGGCGAACGCCTGGAAGACCTGCAGCCCTTCGTCGCC
GACGAATTCGCCGCGGCTTTGCTCGGCATGTCCGCCTGA
ATGCTGAGATTCTTCAAGAAAAAACCGCCCGCGCCCGTCCCTGAACCGGCGCAGGCCCCCCCGCCCGCCGATCCGGCCGG
CCAGGCCGCACCCGTTCCCGCCCCGTCCGTCGACGCGCCCCCGGCACCTCCCGAGGCAACGCCAGCGCCGCCGCCCTGGC
CGCAGGGCCATGCCGAGGCCATCGACCTGCAGGATGCCTCCGCGGGCGTGCCGCAACAATCGCCCGTGTTCCCCACGCCG
GCCCCCCATACCGAAGCGCCCTTGCAGCCGGCGGCGCCGGTCGAGGCCGAAGCCCCCGCCCCAGCGGAGCCGGCGGCGGC
CAGGACGTCCTGGCTGCAACGCCTCAAGCAGGGCCTGTCGCGCACGGGCCAGAGCATTGGCGGCCTGTTCGTGGGCGTCA
AGGTCGACGAGAACCTCTTCGAGGAGCTCGAAACCGCGCTCATTATGGCCGATGCCGGTATGGAGGCCACGCAAAAGCTC
CTGACCGCGCTGCGCGCCCGGGTCAAGAAAGACCGCCTGGAAGACGCCACGCAGGTGCGCGAGGCCTTGCGGCAGATCCT
GGCCGACCACCTGCGGCCGCTGGAGCGTCGCTTCGACCTGGCGCGCGCCAAACCGCTGGTGGTCATGATTGCCGGCGTGA
ACGGGGCCGGCAAGACCACGTCGATCGGCAAGCTGGCCAATACCTTCCAGAGGCAGGGCGCCAGCGTCCTGCTCGCCGCC
GGGGATACCTTCCGCGCGGCGGCGCGCGAGCAGCTCATGGAATGGGGCGCCCGCAACAACGTCACGGTCATCGCCCAGGA
AGGCGGCGACCCGGCGGCGGTGGCTTTCGATGCGGTGAACGCCGCGCGCGCCCGGGGGGCGGGCGTGGTGATGGTGGATA
CGGCGGGCCGCCTGCCCACGCAGTTGCACCTGATGGAAGAGCTGAAGAAAATCCGGCGCGTGATCGCCAAGGCCGACAGC
GCGGCGCCGCATGAGGTCCTGCTGGTGGTCGACGGCAATACTGGCCAGAATGCGCTGGCCCAGATCCGCGCCTTCGATGC
CGCCATCAATCTCACCGGTCTGGTGGTCACCAAGCTGGACGGCACGGCCAAGGGCGGCACGCTGGCGGCCGTGGCGGCCG
GCAGCCAGGGCGTGCGCCCCGTGCCGGTGTACTGGATCGGCGTGGGCGAACGCCTGGAAGACCTGCAGCCCTTCGTCGCC
GACGAATTCGCCGCGGCTTTGCTCGGCATGTCCGCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
49.649 |
100 |
0.515 |