Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | A9958_RS06670 | Genome accession | NZ_CP016157 |
| Coordinates | 1410735..1411709 (+) | Length | 324 a.a. |
| NCBI ID | WP_105966585.1 | Uniprot ID | - |
| Organism | Staphylococcus simulans strain MR2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1405735..1416709
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9958_RS06640 (A9958_06600) | - | 1406544..1407086 (+) | 543 | WP_106421013.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| A9958_RS06645 (A9958_06605) | - | 1407099..1408556 (+) | 1458 | WP_103364379.1 | rhomboid family protein | - |
| A9958_RS06650 (A9958_06610) | - | 1408540..1408740 (+) | 201 | WP_002481044.1 | YqgQ family protein | - |
| A9958_RS06655 (A9958_06615) | - | 1408740..1409726 (+) | 987 | WP_002481043.1 | ROK family glucokinase | - |
| A9958_RS06660 (A9958_06620) | - | 1409726..1410055 (+) | 330 | WP_105966587.1 | MTH1187 family thiamine-binding protein | - |
| A9958_RS06665 (A9958_06625) | - | 1410055..1410678 (+) | 624 | WP_057510470.1 | MBL fold metallo-hydrolase | - |
| A9958_RS06670 (A9958_06630) | comGA | 1410735..1411709 (+) | 975 | WP_105966585.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A9958_RS06675 (A9958_06635) | comGB | 1411681..1412754 (+) | 1074 | WP_105977709.1 | competence type IV pilus assembly protein ComGB | - |
| A9958_RS06680 (A9958_06640) | comGC | 1412772..1413101 (+) | 330 | WP_002481038.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| A9958_RS06685 (A9958_06645) | - | 1413104..1413457 (+) | 354 | WP_257790907.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| A9958_RS06690 (A9958_06650) | comGF | 1413748..1414242 (+) | 495 | WP_002481036.1 | competence type IV pilus minor pilin ComGF | - |
| A9958_RS06700 (A9958_06660) | - | 1414407..1414946 (+) | 540 | WP_002481034.1 | shikimate kinase | - |
| A9958_RS06705 (A9958_06665) | gcvT | 1415125..1416219 (+) | 1095 | WP_023015155.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36980.98 Da Isoelectric Point: 7.7580
>NTDB_id=185865 A9958_RS06670 WP_105966585.1 1410735..1411709(+) (comGA) [Staphylococcus simulans strain MR2]
MKRLFEKILIDAIAQRVSDIHFIQIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFLKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
MKRLFEKILIDAIAQRVSDIHFIQIEHAVLIKFRVNDMLLNYESIEITTYQKLLTFLKFLSGLDVSTYHQAQSGQTTFKH
QMLYNLRVSTLPLSLGMESCVIRVSPQYFTQEFECEGPKHFHHLMNKKQGLILFTGPTGSGKSTMMYEMVSFAKEKLNLN
IITVEDPVEKRIPGITQISVNEKAGINYESSFKAILRCDPDIILIGEIREASIAKCVIQASLSGHLVLSTLHSNDCEGAL
LRLLEMGITPQEAQQAIALISNQRLVTNQSGHRELAYETLYQSDIQYFFKNNHMLPKHFIKLSKVLSQMNKEGVICEEVF
KRYT
Nucleotide
Download Length: 975 bp
>NTDB_id=185865 A9958_RS06670 WP_105966585.1 1410735..1411709(+) (comGA) [Staphylococcus simulans strain MR2]
ATGAAAAGGCTATTTGAAAAAATATTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACAAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACTTTTTTGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGTTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
ATGAAAAGGCTATTTGAAAAAATATTAATCGACGCAATCGCACAACGCGTATCAGACATTCATTTTATACAAATAGAACA
TGCCGTACTTATTAAGTTCAGAGTTAATGATATGTTATTAAATTATGAATCCATTGAGATTACAACGTATCAGAAGTTAC
TTACTTTTTTGAAGTTCTTATCTGGCTTGGATGTTTCTACTTATCACCAAGCACAAAGTGGCCAAACAACTTTCAAGCAT
CAAATGCTTTACAATTTAAGAGTATCTACTTTGCCGCTCTCATTAGGAATGGAAAGTTGCGTTATTAGAGTTTCCCCACA
GTATTTTACTCAAGAATTTGAATGTGAAGGTCCAAAACACTTTCATCACCTAATGAATAAAAAACAAGGTTTAATTTTAT
TTACAGGTCCAACGGGTTCAGGGAAGAGTACTATGATGTATGAAATGGTTTCTTTTGCGAAAGAAAAATTAAACCTAAAC
ATTATTACAGTCGAAGACCCAGTAGAGAAGAGGATTCCTGGGATAACTCAAATCTCTGTAAATGAAAAAGCCGGTATCAA
CTATGAAAGTTCTTTCAAAGCTATTTTACGATGTGATCCAGATATTATCCTTATCGGAGAAATTCGTGAAGCATCTATTG
CTAAATGTGTTATTCAAGCCTCATTAAGCGGACATTTGGTGTTGTCTACATTACATTCTAATGATTGCGAGGGTGCCTTG
TTACGTTTACTAGAAATGGGCATAACACCGCAAGAGGCGCAACAAGCCATAGCCTTAATATCAAATCAAAGGCTAGTTAC
AAATCAATCAGGACATCGTGAACTAGCATATGAGACATTATATCAATCAGATATTCAATACTTTTTTAAAAACAATCATA
TGCTGCCCAAACATTTTATAAAATTAAGCAAAGTACTTAGTCAGATGAACAAAGAAGGCGTTATTTGTGAAGAAGTGTTT
AAAAGATATACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
60.372 |
99.691 |
0.602 |
| comGA | Staphylococcus aureus N315 |
60.372 |
99.691 |
0.602 |
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
37.931 |
98.457 |
0.373 |