Detailed information
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | A6J43_RS08290 | Genome accession | NZ_CP020415 |
| Coordinates | 1423957..1424919 (-) | Length | 320 a.a. |
| NCBI ID | WP_082277595.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain FDAARGOS_204 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1418957..1429919
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J43_RS08255 (A6J43_08290) | yaaA | 1419006..1419785 (-) | 780 | WP_003692836.1 | peroxide stress protein YaaA | - |
| A6J43_RS08260 (A6J43_08295) | dapC | 1419941..1421128 (-) | 1188 | WP_082277589.1 | succinyldiaminopimelate transaminase | - |
| A6J43_RS08265 (A6J43_08300) | dut | 1421206..1421658 (-) | 453 | WP_003702446.1 | dUTP diphosphatase | - |
| A6J43_RS13440 | - | 1421824..1422532 (+) | 709 | Protein_1435 | AzlC family ABC transporter permease | - |
| A6J43_RS08275 (A6J43_08310) | - | 1422529..1422837 (+) | 309 | WP_050170999.1 | AzlD family protein | - |
| A6J43_RS08280 (A6J43_08315) | pilL | 1422907..1423380 (-) | 474 | WP_192941126.1 | PilX family type IV pilin | Machinery gene |
| A6J43_RS08285 (A6J43_08320) | pilK | 1423382..1423978 (-) | 597 | WP_082277593.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| A6J43_RS08290 (A6J43_08325) | pilJ | 1423957..1424919 (-) | 963 | WP_082277595.1 | PilW family protein | Machinery gene |
| A6J43_RS08295 (A6J43_08330) | pilV/pilI | 1424916..1425524 (-) | 609 | WP_082277597.1 | type IV pilus modification protein PilV | Regulator |
| A6J43_RS08300 (A6J43_08335) | pilH | 1425556..1426221 (-) | 666 | WP_050170995.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| A6J43_RS08310 (A6J43_08340) | dnaB | 1426529..1427935 (-) | 1407 | WP_047920816.1 | replicative DNA helicase | - |
| A6J43_RS08315 (A6J43_08350) | - | 1428098..1428679 (+) | 582 | WP_003698180.1 | superoxide dismutase | - |
| A6J43_RS08325 (A6J43_08360) | - | 1428909..1429418 (-) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
Sequence
Protein
Download Length: 320 a.a. Molecular weight: 35332.14 Da Isoelectric Point: 8.9759
>NTDB_id=185834 A6J43_RS08290 WP_082277595.1 1423957..1424919(-) (pilJ) [Neisseria gonorrhoeae strain FDAARGOS_204]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHTEKDVVSDVAQKNRLFSLKMNSTNKVISNGTDNKLIPIAESPNIRYQGFTHRPNALIFQYGIDDVNASADTTV
VSSCAAISKPGKQILNLEDVKKELQIVSQDKEQNGNIARQRHVVNAYAVGRFGNEEGLFRFQLNEKGEWGNPQLLAKKIK
RMRVRYIYVSGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHTEKDVVSDVAQKNRLFSLKMNSTNKVISNGTDNKLIPIAESPNIRYQGFTHRPNALIFQYGIDDVNASADTTV
VSSCAAISKPGKQILNLEDVKKELQIVSQDKEQNGNIARQRHVVNAYAVGRFGNEEGLFRFQLNEKGEWGNPQLLAKKIK
RMRVRYIYVSGCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGGSDAKIAASSDNIIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 963 bp
>NTDB_id=185834 A6J43_RS08290 WP_082277595.1 1423957..1424919(-) (pilJ) [Neisseria gonorrhoeae strain FDAARGOS_204]
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGAAAAGGATGTTGTTTCCGATGTGGCGCAAAAAAACCGTCTTTTTTCCTTAAAAAT
GAACAGTACAAATAAAGTTATCTCCAACGGTACAGATAATAAACTTATCCCCATAGCGGAATCTCCAAATATCAGATATC
AGGGTTTTACCCATCGCCCTAACGCATTGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGATACTACCGTC
GTCAGCAGCTGTGCCGCAATATCGAAACCGGGCAAGCAAATCCTTAATTTAGAAGATGTAAAAAAAGAATTGCAGATTGT
GAGTCAGGATAAGGAGCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGTTTGGCA
ATGAGGAAGGTTTGTTCCGCTTCCAATTGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAA
CGTATGAGAGTGCGGTATATCTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATAC
GGATAAATTCGACAGCTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGCGGTAGTGATGCCAAGATTGCCG
CTTCTTCAGATAATATTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTT
TGA
ATGAAACGTAAAATGCTAAACGTACCAAAAGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGAAAAGGATGTTGTTTCCGATGTGGCGCAAAAAAACCGTCTTTTTTCCTTAAAAAT
GAACAGTACAAATAAAGTTATCTCCAACGGTACAGATAATAAACTTATCCCCATAGCGGAATCTCCAAATATCAGATATC
AGGGTTTTACCCATCGCCCTAACGCATTGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGATACTACCGTC
GTCAGCAGCTGTGCCGCAATATCGAAACCGGGCAAGCAAATCCTTAATTTAGAAGATGTAAAAAAAGAATTGCAGATTGT
GAGTCAGGATAAGGAGCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGTTTGGCA
ATGAGGAAGGTTTGTTCCGCTTCCAATTGAATGAAAAGGGCGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAA
CGTATGAGAGTGCGGTATATCTATGTTTCCGGTTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATAC
GGATAAATTCGACAGCTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGCGGTAGTGATGCCAAGATTGCCG
CTTCTTCAGATAATATTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTT
TGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
87.188 |
100 |
0.872 |