Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   A8P51_RS12350 Genome accession   NZ_CP016071
Coordinates   2644869..2646146 (+) Length   425 a.a.
NCBI ID   WP_064972062.1    Uniprot ID   -
Organism   Lactiplantibacillus plantarum strain NCU116 isolate Chinese pickle     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 2639869..2651146
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A8P51_RS12325 (A8P51_12325) tsf 2640766..2641644 (+) 879 WP_003644498.1 translation elongation factor Ts -
  A8P51_RS12330 (A8P51_12330) pyrH 2641844..2642566 (+) 723 WP_003640737.1 UMP kinase -
  A8P51_RS12335 (A8P51_12335) frr 2642568..2643131 (+) 564 WP_003640736.1 ribosome recycling factor -
  A8P51_RS12340 (A8P51_12340) - 2643251..2644030 (+) 780 WP_063722583.1 isoprenyl transferase -
  A8P51_RS12345 (A8P51_12345) - 2644046..2644831 (+) 786 WP_063722584.1 phosphatidate cytidylyltransferase -
  A8P51_RS12350 (A8P51_12350) eeP 2644869..2646146 (+) 1278 WP_064972062.1 RIP metalloprotease RseP Regulator
  A8P51_RS12355 (A8P51_12355) - 2646186..2647895 (+) 1710 WP_063722585.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 45811.31 Da        Isoelectric Point: 9.5616

>NTDB_id=185615 A8P51_RS12350 WP_064972062.1 2644869..2646146(+) (eeP) [Lactiplantibacillus plantarum strain NCU116 isolate Chinese pickle]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGPDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDESEVKHYAVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTADSVARTAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLTLTINRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWGIAKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=185615 A8P51_RS12350 WP_064972062.1 2644869..2646146(+) (eeP) [Lactiplantibacillus plantarum strain NCU116 isolate Chinese pickle]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTCATCGTCCATGAATTTGGGCACTTTTACTTTGC
CAAAAAGGCTGGGATTCTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCAACAA
CTTATACGTTACGGTTTCTGCCAATCGGTGGTTACGTACGGATGGCCGGTGTGGCCGATGATGAAGATGAAGAACTCAAG
CCCGGAACGCCAGTTAGTTTGCAAATTGGTCCGGATGGGATTGTTCATTCAATCAATGCTAGTAAGAAGACAACGTTGTT
CAATGGAATTCCACTGTCAGTGACGGCGACTGATCTCGAAAAAGAACTCTGGATCGAAGGTTATGAGAACGGGGACGAAA
GTGAAGTTAAACACTACGCCGTCGATCATGACGCTACGATCGTTGAAAGCGATGGTACCGAAGTTCAAATTGCACCGGTC
GACGTCCAATTTCAATCGGCCAAGTTATGGCAACGAATGTTGACGAATTTTGCCGGACCGATGAATAACTTCATTTTGGC
CATCATTACATTTGCAATTCTTGCCTTTATGCAGGGTGGTGTTACGAGTACAACGACCCACGTAGCGGCGACGACAGCAG
ACTCAGTTGCCCGTACGGCCGGTATTCAAAAGGGCGATCAAATCGTGGCGGTTAACGGTAAAAAAATGACGAGTGCCCAA
TCGATTTCGCTGTTGATTCAAGACAGCCCGAAGCAACGGTTGACTTTGACCATCAACCGGGCCGGTCAGACTAAAAAAAT
TGCGGTTACCCCTGCTGCCAAGACGGTCTCTGGTAATCGAATCGGTCAAATCGGGGTCCAATGGGCGACTAAGACCGACA
CGAGCCTGGGGGCCAAGTTAGCATACGGCTTTACTGGTTCGTGGGGAATTGCCAAACAGATTTTTCAAGTGCTTGGTCGG
ATGGTCACTCACGGGTTCAGTTTGAATGATTTAGGTGGGCCGGTGGCAATCTTTGCCACGACCTCGCAAGCCGCTAAGTC
CGGGGTGCGCACGGTGATCTATTTGCTCGCCGTGCTGTCGATCAACCTTGGAATTGTTAATTTATTACCGATTCCAGCAC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGGGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCCTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAGCGATATTTCTTCTAA

Domains


Predicted by InterproScan.

(7-411)

(210-260)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.065

100

0.494

  eeP Streptococcus thermophilus LMD-9

49.065

100

0.494


Multiple sequence alignment