Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BSK2_RS15220 Genome accession   NZ_CP020367
Coordinates   2964049..2964744 (-) Length   231 a.a.
NCBI ID   WP_033884849.1    Uniprot ID   -
Organism   Bacillus subtilis strain GQJK2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2959049..2969744
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSK2_RS15200 (BSK2_15200) yttA 2959476..2960222 (+) 747 WP_046381284.1 LMBR1 domain-containing protein -
  BSK2_RS15205 (BSK2_15205) bceB 2960259..2962199 (-) 1941 WP_080529693.1 bacitracin ABC transporter permease BceB -
  BSK2_RS15210 (BSK2_15210) bceA 2962189..2962950 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  BSK2_RS15215 (BSK2_15215) bceS 2963052..2964056 (-) 1005 WP_080529694.1 two-component sensor histidine kinase BceS -
  BSK2_RS15220 (BSK2_15220) braR 2964049..2964744 (-) 696 WP_033884849.1 two-component response regulator BceR Regulator
  BSK2_RS15225 (BSK2_15225) ytrF 2964841..2966151 (-) 1311 WP_015251399.1 ABC transporter permease YtrF -
  BSK2_RS15230 (BSK2_15230) ytrE 2966141..2966836 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  BSK2_RS15235 (BSK2_15235) ytrD 2966851..2967828 (-) 978 WP_080529695.1 ABC transporter permease YtrD -
  BSK2_RS15240 (BSK2_15240) ytrC 2967858..2968844 (-) 987 WP_003246175.1 ABC transporter permease YtrC -
  BSK2_RS15245 (BSK2_15245) ytrB 2968838..2969716 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26893.77 Da        Isoelectric Point: 5.3731

>NTDB_id=185397 BSK2_RS15220 WP_033884849.1 2964049..2964744(-) (braR) [Bacillus subtilis strain GQJK2]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=185397 BSK2_RS15220 WP_033884849.1 2964049..2964744(-) (braR) [Bacillus subtilis strain GQJK2]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTTCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment