Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   BSK2_RS09600 Genome accession   NZ_CP020367
Coordinates   1909781..1911784 (+) Length   667 a.a.
NCBI ID   WP_069703551.1    Uniprot ID   -
Organism   Bacillus subtilis strain GQJK2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1904781..1916784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSK2_RS09560 (BSK2_09560) pghL 1905144..1905902 (+) 759 WP_080529365.1 gamma-polyglutamate hydrolase PghL -
  BSK2_RS09565 (BSK2_09565) - 1905929..1906378 (-) 450 WP_003245454.1 YndM family protein -
  BSK2_RS09570 (BSK2_09570) fosM 1906586..1907020 (+) 435 WP_032725818.1 FosM family fosfomycin resistance protein -
  BSK2_RS21385 - 1906929..1907206 (+) 278 Protein_1834 hypothetical protein -
  BSK2_RS09580 (BSK2_09580) dinR/lexA 1907559..1908176 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  BSK2_RS09585 (BSK2_09585) yneA 1908326..1908643 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  BSK2_RS09590 (BSK2_09590) dinL 1908662..1909315 (+) 654 WP_015714011.1 recombinase family protein -
  BSK2_RS09595 (BSK2_09595) ynzC 1909379..1909612 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  BSK2_RS09600 (BSK2_09600) recP/tkt 1909781..1911784 (+) 2004 WP_069703551.1 transketolase Machinery gene
  BSK2_RS09605 (BSK2_09605) sirA 1911937..1912383 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  BSK2_RS09610 (BSK2_09610) yneF 1912469..1912687 (+) 219 WP_003221221.1 YneF family protein -
  BSK2_RS09615 (BSK2_09615) ynzD 1912761..1912934 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  BSK2_RS09620 (BSK2_09620) ccdA 1913154..1913861 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  BSK2_RS09625 (BSK2_09625) yneI 1913950..1914312 (+) 363 WP_003245707.1 response regulator -
  BSK2_RS09630 (BSK2_09630) yneJ 1914391..1914882 (+) 492 WP_010886519.1 CcdC family protein -
  BSK2_RS09635 (BSK2_09635) yneK 1914913..1915341 (-) 429 WP_003231580.1 DynA interaction protein YneK -
  BSK2_RS09640 (BSK2_09640) cotM 1915575..1915967 (-) 393 WP_015251997.1 outer spore coat protein CotM -
  BSK2_RS09645 (BSK2_09645) sspP 1916048..1916194 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  BSK2_RS09650 (BSK2_09650) sspO 1916226..1916372 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72284.39 Da        Isoelectric Point: 4.7291

>NTDB_id=185356 BSK2_RS09600 WP_069703551.1 1909781..1911784(+) (recP/tkt) [Bacillus subtilis strain GQJK2]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTAEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=185356 BSK2_RS09600 WP_069703551.1 1909781..1911784(+) (recP/tkt) [Bacillus subtilis strain GQJK2]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
GCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCAGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACAGCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATTGCCTCCGGG
TCCGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCTGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562


Multiple sequence alignment