Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   BSK2_RS09580 Genome accession   NZ_CP020367
Coordinates   1907559..1908176 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain GQJK2     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1902559..1913176
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSK2_RS09550 (BSK2_09550) yndJ 1902887..1904527 (+) 1641 WP_069703552.1 YndJ family protein -
  BSK2_RS09555 (BSK2_09555) - 1904605..1904919 (+) 315 WP_003245621.1 hypothetical protein -
  BSK2_RS09560 (BSK2_09560) pghL 1905144..1905902 (+) 759 WP_080529365.1 gamma-polyglutamate hydrolase PghL -
  BSK2_RS09565 (BSK2_09565) - 1905929..1906378 (-) 450 WP_003245454.1 YndM family protein -
  BSK2_RS09570 (BSK2_09570) fosM 1906586..1907020 (+) 435 WP_032725818.1 FosM family fosfomycin resistance protein -
  BSK2_RS21385 - 1906929..1907206 (+) 278 Protein_1834 hypothetical protein -
  BSK2_RS09580 (BSK2_09580) dinR/lexA 1907559..1908176 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  BSK2_RS09585 (BSK2_09585) yneA 1908326..1908643 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  BSK2_RS09590 (BSK2_09590) dinL 1908662..1909315 (+) 654 WP_015714011.1 recombinase family protein -
  BSK2_RS09595 (BSK2_09595) ynzC 1909379..1909612 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  BSK2_RS09600 (BSK2_09600) recP/tkt 1909781..1911784 (+) 2004 WP_069703551.1 transketolase Machinery gene
  BSK2_RS09605 (BSK2_09605) sirA 1911937..1912383 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  BSK2_RS09610 (BSK2_09610) yneF 1912469..1912687 (+) 219 WP_003221221.1 YneF family protein -
  BSK2_RS09615 (BSK2_09615) ynzD 1912761..1912934 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=185355 BSK2_RS09580 WP_003238209.1 1907559..1908176(-) (dinR/lexA) [Bacillus subtilis strain GQJK2]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=185355 BSK2_RS09580 WP_003238209.1 1907559..1908176(-) (dinR/lexA) [Bacillus subtilis strain GQJK2]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGTTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACTGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1