Detailed information    

insolico Bioinformatically predicted

Overview


Name   addA   Type   Machinery gene
Locus tag   A9C19_RS15500 Genome accession   NZ_CP016020
Coordinates   3200042..3203764 (-) Length   1240 a.a.
NCBI ID   WP_072580778.1    Uniprot ID   A0A1L3MUG1
Organism   Bacillus weihaiensis strain Alg07     
Function   homologous recombination; plasmid transformation (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3195042..3208764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9C19_RS15490 (A9C19_15215) - 3195370..3198771 (-) 3402 WP_072580776.1 AAA family ATPase -
  A9C19_RS15495 (A9C19_15220) - 3198768..3199949 (-) 1182 WP_072580777.1 metallophosphoesterase family protein -
  A9C19_RS15500 (A9C19_15225) addA 3200042..3203764 (-) 3723 WP_072580778.1 helicase-exonuclease AddAB subunit AddA Machinery gene
  A9C19_RS15505 (A9C19_15230) addB 3203757..3207248 (-) 3492 WP_072580779.1 helicase-exonuclease AddAB subunit AddB Machinery gene

Sequence


Protein


Download         Length: 1240 a.a.        Molecular weight: 142983.28 Da        Isoelectric Point: 4.9645

>NTDB_id=185324 A9C19_RS15500 WP_072580778.1 3200042..3203764(-) (addA) [Bacillus weihaiensis strain Alg07]
MSEFMAKPENSQWTDDQWKAIAASGQDILVAAAAGSGKTAVLVERIIRKILSRENPVDVDSLLVVTFTNASAAEMRSRIG
EALEKSLKDNPSSLHLRRQLTLLNKASISTLHSFCLQVVRKYYYLINIDPGFRIADQTEGQLLIDEVLDELFEEEYSDEN
NEEFFDLVDRYTSDRSDMELQTLIRELYFFSRSHPTPTEWLNDLANMYDLKDEADFESLPFLTFLLQDIDMQLSGVREQL
LQAMELTKQPAGPAPRAENLEDDLKQLANIMAHKNSWDQLGEQLKSFKPSRAKIVKGDQYDKKLTDQVTSLRNAAKKQIE
QLRDELFSRSLSNYKQDFLHLKPVVSKLVSLVQQFALRYEGMKKEKGLVDFADLEHYCLQILKGEDDQSSEAALYYKHQF
VEVLVDEYQDTNLVQESILKLVTKDTESAGNLFMVGDVKQSIYRFRLAEPFLFLSKYKRFTQAGDVSGMRIDLSKNFRSR
SEILDGTNYLFKQIMGENVGEIIYDHDAELKLGASYPENEQMSTELLLIEKGGKDNESESEELEQAGLFDEQELETVQLE
ARIMAKRIKKLIEQQFPVYDRGIDGTRPMTYRDVVILLRSMPWAPQIMEEFKQAGIPVYANLSNGYFEATEVAIMMSLLK
VIDNPFQDIPLAAVLRSPIVDATENEMALIRTFDRKGTFYDAVKACVSSEGDERHQSLIQKLKAFVALLESWRDLARQGS
VSELIWQLYRDTKFFDFVGGMPGGKQRQANLRALYDRARQYEATSFRGLFRFLRFIERMQDRGDDLGAARALGEQEDVVR
LMTIHSSKGLEFPVVFVAGLSKQFNMMDLNKKYLLDKELGFGTKLINPKLRVSYPTLPYLALKKKMRMELLAEEMRVLYV
ALTRAKEKLYLVGTLKDAEKKLTDWRNHLSHQEWLLPDFERAKAKSYMDWVGPALIRHKDCYMMSDGMVCLQEEISQHPS
KWTVEKVNGEDLKEVFANEEQINTERLASIQKGEEVSIESDQKALVKEQLTFVYPYLENTKKRSKQSVTELKRQQEVRDE
YSDQQFVKKERSSSFLYNRPNFMQEKSISAAERGTAMHTVMQHLSITEPVTAERVQLKIKELIEKEILTEQLASVIDRHQ
IVQFFSTEVGARMLQAKQVYREVPFSYALKSDGDNEMDEPILVQGVIDCLFEDELGTVLLDYKTDTIKGKFASFIDAEPI
LKDRYQVQIDLYGKAIEEIIQRPLQERYLFFFDGGYLVKM

Nucleotide


Download         Length: 3723 bp        

>NTDB_id=185324 A9C19_RS15500 WP_072580778.1 3200042..3203764(-) (addA) [Bacillus weihaiensis strain Alg07]
ATGAGTGAGTTTATGGCAAAACCAGAAAATAGCCAGTGGACGGATGATCAATGGAAGGCAATCGCTGCTAGTGGACAGGA
TATTTTAGTTGCGGCCGCTGCTGGATCTGGAAAAACAGCTGTATTAGTTGAACGAATTATACGAAAGATTCTTTCAAGGG
AAAACCCTGTAGATGTAGATTCCCTTCTAGTCGTGACATTTACAAATGCATCTGCTGCGGAAATGAGGAGCCGTATTGGA
GAGGCCCTTGAGAAATCACTAAAGGATAACCCATCTTCTCTTCATTTACGTAGACAGCTTACTTTATTAAATAAAGCATC
TATATCAACTCTTCATTCTTTCTGCTTACAGGTTGTAAGGAAGTACTATTATTTAATTAATATTGATCCAGGCTTCCGTA
TTGCTGATCAAACAGAGGGACAACTCCTTATTGATGAGGTACTCGATGAGTTATTTGAAGAAGAATACAGCGATGAAAAT
AATGAAGAGTTTTTTGATTTGGTTGATCGTTATACATCAGACCGAAGTGATATGGAGCTTCAAACACTGATTCGAGAGCT
GTATTTTTTCTCGAGATCTCATCCTACTCCAACCGAGTGGCTTAACGATCTAGCTAACATGTATGATCTTAAAGATGAAG
CGGATTTTGAATCGTTACCATTTTTGACATTCTTACTTCAAGATATCGATATGCAGCTAAGTGGGGTTCGTGAACAATTA
TTACAAGCAATGGAGCTAACAAAGCAGCCAGCAGGTCCTGCCCCACGTGCAGAAAATTTAGAGGATGATTTGAAGCAGCT
TGCCAACATTATGGCGCATAAGAATTCATGGGATCAATTAGGGGAGCAGCTTAAGAGCTTTAAGCCTTCACGTGCAAAAA
TAGTGAAGGGTGATCAATATGATAAAAAGCTGACAGATCAAGTAACATCCTTACGAAATGCAGCAAAAAAGCAAATAGAG
CAATTACGAGATGAATTATTTTCGCGCTCCCTTTCTAATTACAAACAGGATTTTCTACATTTAAAGCCTGTGGTGTCCAA
ACTTGTCTCACTTGTTCAACAATTCGCGCTCCGATACGAGGGAATGAAGAAGGAAAAGGGACTTGTTGATTTTGCTGATT
TAGAGCATTATTGCTTGCAGATCTTAAAGGGTGAAGACGATCAGTCAAGTGAAGCAGCTCTTTATTACAAGCACCAATTT
GTTGAGGTTCTTGTCGATGAATACCAGGATACGAATCTTGTACAAGAATCGATCTTAAAGCTAGTGACAAAGGATACAGA
ATCAGCTGGCAATTTGTTTATGGTTGGTGATGTAAAGCAATCCATTTACCGCTTTCGCTTGGCTGAGCCTTTCCTTTTTC
TGAGTAAATATAAACGATTTACTCAAGCTGGGGACGTATCGGGGATGAGAATAGATTTATCGAAAAACTTCCGAAGTCGT
TCAGAGATTTTAGATGGCACGAACTACTTGTTTAAGCAGATCATGGGCGAGAATGTTGGAGAGATTATCTATGATCATGA
CGCTGAGCTAAAACTAGGTGCAAGCTACCCTGAAAACGAACAAATGAGTACTGAGCTACTCTTAATTGAGAAGGGTGGCA
AGGACAACGAATCTGAGTCCGAGGAGCTAGAGCAAGCTGGTTTATTTGATGAGCAAGAGCTTGAAACGGTCCAGCTAGAA
GCACGAATCATGGCTAAAAGAATAAAAAAACTTATTGAACAACAATTTCCTGTATATGATCGAGGGATAGATGGAACAAG
ACCGATGACGTATCGAGATGTTGTCATACTATTACGTTCTATGCCATGGGCACCTCAAATTATGGAGGAATTTAAACAAG
CGGGCATCCCTGTCTATGCCAATCTTTCTAATGGATATTTCGAAGCAACAGAAGTCGCGATTATGATGTCCTTGCTAAAA
GTCATCGATAATCCATTTCAGGATATTCCTCTAGCAGCTGTGCTACGTTCACCAATCGTAGATGCGACAGAAAACGAAAT
GGCCTTAATTCGTACCTTTGATCGGAAAGGCACGTTTTATGATGCGGTTAAAGCGTGTGTATCCTCGGAAGGTGATGAAA
GGCATCAAAGCTTGATACAGAAGCTAAAAGCATTTGTCGCTTTACTTGAAAGCTGGCGTGACCTTGCTAGACAAGGATCT
GTTTCTGAATTAATTTGGCAGTTATACCGTGATACAAAGTTTTTTGATTTTGTTGGCGGTATGCCGGGTGGAAAGCAGCG
TCAAGCGAATCTTCGTGCCTTATATGATCGAGCAAGACAATACGAAGCAACGTCCTTTAGAGGTTTGTTCCGCTTCCTTC
GTTTTATTGAAAGAATGCAGGATCGTGGCGATGACCTAGGAGCCGCTCGTGCATTAGGTGAACAAGAGGATGTTGTCAGA
CTCATGACAATTCATAGTTCAAAAGGTCTTGAGTTCCCAGTTGTTTTTGTGGCGGGACTTTCTAAGCAATTCAATATGAT
GGATCTAAATAAAAAGTACCTCCTAGATAAAGAATTAGGTTTTGGGACAAAGTTGATTAATCCGAAATTACGTGTGAGCT
ATCCAACGCTTCCATATCTTGCGTTAAAAAAGAAGATGAGGATGGAATTGCTTGCTGAGGAAATGCGGGTCCTTTATGTT
GCATTAACACGTGCGAAGGAAAAGCTTTACTTGGTAGGTACCTTGAAGGATGCAGAAAAGAAGCTTACTGATTGGCGTAA
TCACCTTTCTCATCAAGAGTGGCTTTTACCTGACTTTGAGAGGGCAAAAGCAAAAAGCTATATGGACTGGGTGGGACCAG
CGTTAATCCGCCATAAGGATTGCTATATGATGTCAGATGGAATGGTATGCTTACAGGAGGAGATCTCTCAGCACCCATCT
AAGTGGACTGTTGAAAAGGTAAATGGAGAGGATCTGAAGGAAGTCTTTGCAAATGAAGAGCAAATAAATACGGAGAGATT
AGCTTCCATTCAAAAAGGGGAAGAGGTATCCATTGAAAGTGACCAGAAGGCATTAGTAAAGGAGCAGCTTACGTTTGTTT
ATCCTTATTTAGAAAATACGAAAAAGCGTTCGAAGCAATCTGTAACCGAGTTGAAAAGACAGCAAGAGGTTAGAGATGAA
TACAGCGATCAGCAGTTTGTAAAGAAGGAACGATCGTCATCATTCCTATACAACCGACCTAATTTCATGCAAGAAAAATC
CATTTCAGCAGCTGAACGAGGAACAGCAATGCATACAGTGATGCAACATCTTTCTATTACAGAACCAGTAACAGCTGAGA
GAGTCCAATTGAAAATTAAAGAGCTGATAGAAAAGGAAATCTTAACAGAACAATTAGCGAGTGTGATTGATCGTCATCAA
ATCGTTCAATTCTTTTCAACGGAGGTTGGAGCTAGAATGCTTCAAGCAAAGCAAGTGTATCGTGAGGTTCCATTTAGCTA
TGCGTTGAAATCAGATGGGGATAATGAAATGGATGAGCCAATTTTAGTACAAGGGGTCATCGACTGCTTATTTGAGGATG
AGCTAGGAACGGTTCTATTAGACTATAAAACAGATACGATTAAGGGGAAATTTGCTAGTTTTATTGATGCAGAGCCTATA
TTGAAGGATCGATATCAAGTTCAAATTGATTTATATGGAAAAGCCATTGAAGAAATCATACAAAGACCTCTACAAGAAAG
ATATTTATTTTTCTTTGACGGTGGTTACTTAGTGAAAATGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1L3MUG1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  addA Bacillus subtilis subsp. subtilis str. 168

58.494

100

0.589


Multiple sequence alignment