Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   A9C19_RS12640 Genome accession   NZ_CP016020
Coordinates   2626915..2627397 (+) Length   160 a.a.
NCBI ID   WP_072580282.1    Uniprot ID   A0A1L3MT17
Organism   Bacillus weihaiensis strain Alg07     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2621915..2632397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9C19_RS12625 (A9C19_12400) - 2622696..2623190 (+) 495 WP_072580279.1 L,D-transpeptidase family protein -
  A9C19_RS12630 (A9C19_12405) - 2623306..2624610 (+) 1305 WP_083584368.1 MFS transporter -
  A9C19_RS12635 (A9C19_12410) - 2625003..2626526 (+) 1524 WP_072580281.1 HD domain-containing phosphohydrolase -
  A9C19_RS12640 (A9C19_12415) kre 2626915..2627397 (+) 483 WP_072580282.1 YkyB family protein Regulator
  A9C19_RS12645 (A9C19_12420) - 2627531..2628091 (-) 561 WP_072580283.1 HD domain-containing protein -
  A9C19_RS12650 (A9C19_12425) - 2628653..2629555 (-) 903 WP_072580284.1 chemotaxis protein -
  A9C19_RS12655 (A9C19_12430) - 2629726..2630376 (-) 651 WP_072580285.1 glycoside hydrolase domain-containing protein -
  A9C19_RS12660 (A9C19_12435) - 2630644..2631933 (+) 1290 WP_072580286.1 NCS2 family permease -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18600.55 Da        Isoelectric Point: 10.5659

>NTDB_id=185316 A9C19_RS12640 WP_072580282.1 2626915..2627397(+) (kre) [Bacillus weihaiensis strain Alg07]
MDDHKRLDPKKQQTIENLACAIYIVNRHAKTAPNPKFLYTLKKKALIKLVNEGKAKKEGLHFSNNPKYSKQQSDVLVSAG
EYYFHMPPTKEDFDKLPHLGSLNQTYRNPRTHMSLSKAKLLLQNYVGMKDDRKAHSKPLQARKTRTYEKPVFKKLGESYR

Nucleotide


Download         Length: 483 bp        

>NTDB_id=185316 A9C19_RS12640 WP_072580282.1 2626915..2627397(+) (kre) [Bacillus weihaiensis strain Alg07]
ATGGACGATCATAAACGACTCGATCCTAAAAAACAGCAAACAATTGAAAACCTCGCATGCGCTATTTATATCGTAAATCG
CCATGCTAAAACCGCACCAAATCCTAAATTCCTTTATACTTTAAAGAAAAAAGCCTTAATTAAGCTTGTAAATGAAGGTA
AAGCTAAAAAAGAAGGTTTACACTTTTCAAATAACCCAAAATATAGCAAACAGCAATCTGATGTGCTAGTTTCTGCTGGA
GAGTATTACTTTCATATGCCTCCTACCAAAGAAGACTTCGATAAACTTCCACATTTAGGATCATTAAATCAAACATATCG
TAACCCAAGAACTCATATGTCATTATCAAAAGCTAAGCTCCTTTTACAAAACTATGTAGGCATGAAAGATGACCGGAAAG
CACATTCAAAGCCATTGCAAGCTAGAAAAACTCGTACATATGAAAAACCAGTTTTTAAAAAGCTTGGTGAAAGCTATAGG
TAG

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1L3MT17

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

67.485

100

0.688

Multiple sequence alignment