Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   A9C19_RS06865 Genome accession   NZ_CP016020
Coordinates   1435801..1436592 (+) Length   263 a.a.
NCBI ID   WP_072579253.1    Uniprot ID   -
Organism   Bacillus weihaiensis strain Alg07     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1430801..1441592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9C19_RS06845 (A9C19_06695) ahrC 1431506..1431955 (+) 450 WP_072579250.1 transcriptional regulator AhrC/ArgR -
  A9C19_RS06850 (A9C19_06700) recN 1432223..1433923 (+) 1701 WP_072579251.1 DNA repair protein RecN Machinery gene
  A9C19_RS06855 (A9C19_06705) spoIVB 1434227..1435501 (+) 1275 WP_072581777.1 SpoIVB peptidase -
  A9C19_RS06865 (A9C19_06715) spo0A 1435801..1436592 (+) 792 WP_072579253.1 sporulation transcription factor Spo0A Regulator
  A9C19_RS06870 (A9C19_06720) - 1436703..1437224 (-) 522 WP_072579254.1 hypothetical protein -
  A9C19_RS06875 (A9C19_06725) - 1437358..1437513 (-) 156 WP_072579255.1 YycC family protein -
  A9C19_RS22550 - 1437563..1437907 (+) 345 WP_338022845.1 glycerophosphodiester phosphodiesterase family protein -
  A9C19_RS22555 - 1437853..1438308 (+) 456 WP_338022846.1 glycerophosphodiester phosphodiesterase family protein -
  A9C19_RS06885 (A9C19_06735) - 1438857..1439102 (-) 246 WP_072579256.1 DUF2627 domain-containing protein -
  A9C19_RS06890 (A9C19_06740) - 1439255..1441339 (+) 2085 WP_072581778.1 sigma-54 interaction domain-containing protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 29181.85 Da        Isoelectric Point: 6.7588

>NTDB_id=185310 A9C19_RS06865 WP_072579253.1 1435801..1436592(+) (spo0A) [Bacillus weihaiensis strain Alg07]
MKKIKVCIVDDNRELVGLLEEYLSSQEDIEVLGVAYNGQECLNMLKEKEPDVLVLDIIMPHLDGLGVLEKIRQLDRPQPN
VIMLTAFGQEDVTKKAVDLGAAYFILKPFDMEGLASHIRQVSGNAAPIIKRANGSFRNSVEVPAKGKNLDASITSIIHEI
GVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIESISSLFGYTVSMTK
AKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 792 bp        

>NTDB_id=185310 A9C19_RS06865 WP_072579253.1 1435801..1436592(+) (spo0A) [Bacillus weihaiensis strain Alg07]
GTGAAAAAAATTAAAGTGTGTATAGTTGATGATAATCGTGAACTTGTAGGTTTATTAGAGGAATATTTATCAAGTCAAGA
GGACATAGAGGTTTTAGGTGTAGCTTACAATGGTCAAGAATGTTTAAATATGCTAAAAGAAAAAGAACCAGATGTATTGG
TTTTAGATATTATTATGCCTCACTTGGATGGTCTTGGTGTTTTAGAAAAAATAAGACAATTAGATCGACCACAGCCAAAC
GTTATCATGCTTACAGCATTTGGCCAAGAAGATGTTACGAAAAAAGCTGTTGACCTTGGGGCAGCATACTTTATTTTAAA
ACCATTTGATATGGAAGGACTTGCGAGCCATATCCGTCAAGTAAGTGGCAATGCAGCACCAATTATTAAACGAGCAAATG
GAAGCTTCAGAAATAGTGTTGAAGTGCCAGCTAAAGGGAAAAATCTTGATGCCAGCATTACAAGCATCATTCATGAGATT
GGTGTTCCTGCTCATATTAAAGGCTACCTATACCTACGTGAAGCGATCTCAATGGTATACAATGATATAGAATTATTAGG
ATCGATTACAAAGGTTCTTTATCCTGATATTGCTAAGAAATATAACACAACTGCGTCACGTGTTGAACGCGCGATTCGTC
ACGCTATTGAAGTAGCTTGGAGCCGTGGAAACATTGAATCGATCTCATCTCTGTTTGGCTACACAGTAAGCATGACAAAA
GCAAAACCAACTAATTCAGAGTTTATCGCAATGGTTGCAGATAAATTAAGGCTTGAACACAAGGCGTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-118)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(153-256)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

82.022

100

0.833

Multiple sequence alignment